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Cluster: MGYG000001622_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001622_10 MGYG000001622_10_29 30733 31167 + 4.A.6.1.14
CAZyme MGYG000001622_10 MGYG000001622_10_30 31203 32393 + GH88
TC MGYG000001622_10 MGYG000001622_10_31 32424 32915 + 4.A.6.1.14
TC MGYG000001622_10 MGYG000001622_10_32 32943 33731 + 4.A.6.1.14
TC MGYG000001622_10 MGYG000001622_10_33 33721 34530 + 4.A.6.1.14
CAZyme MGYG000001622_10 MGYG000001622_10_34 34670 36670 + PL12_1
TF MGYG000001622_10 MGYG000001622_10_35 36718 37722 + LacI
TC MGYG000001622_10 MGYG000001622_10_36 37730 38671 + 2.A.69.3.6
pfam MGYG000001622_10 MGYG000001622_10_37 38676 39704 - Asparaginase | Asparaginase_C
pfam MGYG000001622_10 MGYG000001622_10_38 39865 40305 + NfeD
TC MGYG000001622_10 MGYG000001622_10_39 40343 41290 + 8.A.21.2.2
TC MGYG000001622_10 MGYG000001622_10_40 41296 42681 + 2.A.66.1.33
Gene ID: MGYG000001622_10_29
Type: TC
Location: 30733 - 31167 (+)
Gene ID: MGYG000001622_10_30
Type: CAZyme
Location: 31203 - 32393 (+)
Gene ID: MGYG000001622_10_31
Type: TC
Location: 32424 - 32915 (+)
Gene ID: MGYG000001622_10_32
Type: TC
Location: 32943 - 33731 (+)
Gene ID: MGYG000001622_10_33
Type: TC
Location: 33721 - 34530 (+)
Gene ID: MGYG000001622_10_34
Type: CAZyme
Location: 34670 - 36670 (+)
Gene ID: MGYG000001622_10_35
Type: TF
Location: 36718 - 37722 (+)
Gene ID: MGYG000001622_10_36
Type: TC
Location: 37730 - 38671 (+)
Gene ID: MGYG000001622_10_37
Type: pfam
Location: 38676 - 39704 (-)
Gene ID: MGYG000001622_10_38
Type: pfam
Location: 39865 - 40305 (+)
Gene ID: MGYG000001622_10_39
Type: TC
Location: 40343 - 41290 (+)
Gene ID: MGYG000001622_10_40
Type: TC
Location: 41296 - 42681 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001622_10_39 vegetarian > vegan 1.11432 0.00038

🧭 Explore Read Mapping of CGC

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