Cluster: MGYG000001619_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001619
- CGC Family ID: CGCFAM_04893
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001619_43 | MGYG000001619_43_9 | 7638 | 9107 | + | 4.A.1.1.7 |
| TF | MGYG000001619_43 | MGYG000001619_43_10 | 9312 | 9644 | + | HTH_5 |
| pfam | MGYG000001619_43 | MGYG000001619_43_11 | 9742 | 9978 | + | DUF2508 |
| CAZyme | MGYG000001619_43 | MGYG000001619_43_12 | 10020 | 11357 | + | GH13_20 |
| CAZyme | MGYG000001619_43 | MGYG000001619_43_13 | 11362 | 13278 | + | CBM48 | GH13_9 |
Gene ID: MGYG000001619_43_9
Type: TC
Location: 7638 - 9107 (+)
Type: TC
Location: 7638 - 9107 (+)
Gene ID: MGYG000001619_43_10
Type: TF
Location: 9312 - 9644 (+)
Type: TF
Location: 9312 - 9644 (+)
Gene ID: MGYG000001619_43_11
Type: pfam
Location: 9742 - 9978 (+)
Type: pfam
Location: 9742 - 9978 (+)
Gene ID: MGYG000001619_43_12
Type: CAZyme
Location: 10020 - 11357 (+)
Type: CAZyme
Location: 10020 - 11357 (+)
Gene ID: MGYG000001619_43_13
Type: CAZyme
Location: 11362 - 13278 (+)
Type: CAZyme
Location: 11362 - 13278 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp900540335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.