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Cluster: MGYG000001616_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001616_28 MGYG000001616_28_4 3134 4273 - 9.B.10.1.1
TC MGYG000001616_28 MGYG000001616_28_5 4357 5751 - 2.A.25.1.3
TF MGYG000001616_28 MGYG000001616_28_6 6034 6576 - SpoVT_AbrB
TC MGYG000001616_28 MGYG000001616_28_7 6730 7551 - 2.A.102.3.1
CAZyme MGYG000001616_28 MGYG000001616_28_8 7916 9841 + CBM48 | GH13_9
pfam MGYG000001616_28 MGYG000001616_28_9 9838 11046 + NTP_transferase | Hexapep_GlmU
pfam MGYG000001616_28 MGYG000001616_28_10 11043 12155 + NTP_transferase | Hexapep_GlmU
CAZyme MGYG000001616_28 MGYG000001616_28_11 12241 14220 + GT5
CAZyme MGYG000001616_28 MGYG000001616_28_12 14230 16659 + GT35
Gene ID: MGYG000001616_28_4
Type: TC
Location: 3134 - 4273 (-)
Gene ID: MGYG000001616_28_5
Type: TC
Location: 4357 - 5751 (-)
Gene ID: MGYG000001616_28_6
Type: TF
Location: 6034 - 6576 (-)
Gene ID: MGYG000001616_28_7
Type: TC
Location: 6730 - 7551 (-)
Gene ID: MGYG000001616_28_8
Type: CAZyme
Location: 7916 - 9841 (+)
Gene ID: MGYG000001616_28_9
Type: pfam
Location: 9838 - 11046 (+)
Gene ID: MGYG000001616_28_10
Type: pfam
Location: 11043 - 12155 (+)
Gene ID: MGYG000001616_28_11
Type: CAZyme
Location: 12241 - 14220 (+)
Gene ID: MGYG000001616_28_12
Type: CAZyme
Location: 14230 - 16659 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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