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Cluster: MGYG000001615_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001615_6 MGYG000001615_6_43 52703 54625 + CBM48 | GH13_9
pfam MGYG000001615_6 MGYG000001615_6_44 54728 54979 - DUF2508
pfam MGYG000001615_6 MGYG000001615_6_45 55168 55440 + BofA
TC MGYG000001615_6 MGYG000001615_6_46 55473 57233 - 8.A.59.2.1
TC MGYG000001615_6 MGYG000001615_6_47 57471 58433 + 3.A.1.1.29
TC MGYG000001615_6 MGYG000001615_6_48 58451 59356 + 3.A.1.1.29
STP MGYG000001615_6 MGYG000001615_6_49 59417 61144 + SBP_bac_1
TF MGYG000001615_6 MGYG000001615_6_50 61171 61941 + HTH_AraC
CAZyme MGYG000001615_6 MGYG000001615_6_51 61941 64679 + GH38
CAZyme MGYG000001615_6 MGYG000001615_6_52 64682 67303 + GH3
Gene ID: MGYG000001615_6_43
Type: CAZyme
Location: 52703 - 54625 (+)
Gene ID: MGYG000001615_6_44
Type: pfam
Location: 54728 - 54979 (-)
Gene ID: MGYG000001615_6_45
Type: pfam
Location: 55168 - 55440 (+)
Gene ID: MGYG000001615_6_46
Type: TC
Location: 55473 - 57233 (-)
Gene ID: MGYG000001615_6_47
Type: TC
Location: 57471 - 58433 (+)
Gene ID: MGYG000001615_6_48
Type: TC
Location: 58451 - 59356 (+)
Gene ID: MGYG000001615_6_49
Type: STP
Location: 59417 - 61144 (+)
Gene ID: MGYG000001615_6_50
Type: TF
Location: 61171 - 61941 (+)
Gene ID: MGYG000001615_6_51
Type: CAZyme
Location: 61941 - 64679 (+)
Gene ID: MGYG000001615_6_52
Type: CAZyme
Location: 64682 - 67303 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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