Cluster: MGYG000001608_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001608
- CGC Family ID: CGCFAM_06626
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001608_5 | MGYG000001608_5_60 | 65916 | 67856 | + | 9.B.18.2.1 |
| pfam | MGYG000001608_5 | MGYG000001608_5_61 | 67867 | 68730 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | MGYG000001608_5 | MGYG000001608_5_62 | 68929 | 70542 | + | 3.A.1.121.4 |
| pfam | MGYG000001608_5 | MGYG000001608_5_63 | 70601 | 71533 | + | 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | MGYG000001608_5 | MGYG000001608_5_64 | 71555 | 72742 | - | GT2 |
| STP | MGYG000001608_5 | MGYG000001608_5_65 | 72744 | 74672 | - | HATPase_c | HisKA | PAS | Response_reg |
| pfam | MGYG000001608_5 | MGYG000001608_5_66 | 74705 | 75784 | - | Exo_endo_phos |
| CAZyme | MGYG000001608_5 | MGYG000001608_5_67 | 75790 | 76641 | - | GT2 |
| CAZyme | MGYG000001608_5 | MGYG000001608_5_68 | 76658 | 77812 | - | GT4 |
| NULL(UNKNOWN) | MGYG000001608_5 | MGYG000001608_5_69 | 77822 | 78991 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001608_5 | MGYG000001608_5_70 | 78969 | 81320 | - | DUF4842 |
| CAZyme | MGYG000001608_5 | MGYG000001608_5_71 | 81454 | 82500 | - | GT2 |
| CAZyme | MGYG000001608_5 | MGYG000001608_5_72 | 82505 | 83431 | - | GT2 |
Gene ID: MGYG000001608_5_60
Type: TC
Location: 65916 - 67856 (+)
Type: TC
Location: 65916 - 67856 (+)
Gene ID: MGYG000001608_5_61
Type: pfam
Location: 67867 - 68730 (+)
Type: pfam
Location: 67867 - 68730 (+)
Gene ID: MGYG000001608_5_62
Type: TC
Location: 68929 - 70542 (+)
Type: TC
Location: 68929 - 70542 (+)
Gene ID: MGYG000001608_5_63
Type: pfam
Location: 70601 - 71533 (+)
Type: pfam
Location: 70601 - 71533 (+)
Gene ID: MGYG000001608_5_64
Type: CAZyme
Location: 71555 - 72742 (-)
Type: CAZyme
Location: 71555 - 72742 (-)
Gene ID: MGYG000001608_5_65
Type: STP
Location: 72744 - 74672 (-)
Type: STP
Location: 72744 - 74672 (-)
Gene ID: MGYG000001608_5_66
Type: pfam
Location: 74705 - 75784 (-)
Type: pfam
Location: 74705 - 75784 (-)
Gene ID: MGYG000001608_5_67
Type: CAZyme
Location: 75790 - 76641 (-)
Type: CAZyme
Location: 75790 - 76641 (-)
Gene ID: MGYG000001608_5_68
Type: CAZyme
Location: 76658 - 77812 (-)
Type: CAZyme
Location: 76658 - 77812 (-)
Gene ID: MGYG000001608_5_69
Type:
Location: 77822 - 78991 (-)
Type:
Location: 77822 - 78991 (-)
Gene ID: MGYG000001608_5_70
Type: pfam
Location: 78969 - 81320 (-)
Type: pfam
Location: 78969 - 81320 (-)
Gene ID: MGYG000001608_5_71
Type: CAZyme
Location: 81454 - 82500 (-)
Type: CAZyme
Location: 81454 - 82500 (-)
Gene ID: MGYG000001608_5_72
Type: CAZyme
Location: 82505 - 83431 (-)
Type: CAZyme
Location: 82505 - 83431 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Gabonibacter
Species
Gabonibacter sp900543425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.