Cluster: MGYG000001607_CGC12
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001607
- CGC Family ID: CGCFAM_02156
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001607_14 | MGYG000001607_14_1 | 386 | 4615 | + | GH39 |
| CAZyme | MGYG000001607_14 | MGYG000001607_14_2 | 4867 | 11154 | + | GH43_22 | GH43_27 |
| CAZyme | MGYG000001607_14 | MGYG000001607_14_3 | 11158 | 13080 | + | GH43_29 |
| pfam | MGYG000001607_14 | MGYG000001607_14_4 | 13109 | 16042 | + | Big_2 | Big_2 | Laminin_G_3 | Laminin_G_3 | aBig_2 |
| CAZyme | MGYG000001607_14 | MGYG000001607_14_5 | 16234 | 20454 | + | GH146 |
| CAZyme | MGYG000001607_14 | MGYG000001607_14_6 | 20580 | 24722 | + | GH146 |
| TC | MGYG000001607_14 | MGYG000001607_14_7 | 24928 | 25992 | + | 3.A.1.2.14 |
| TF | MGYG000001607_14 | MGYG000001607_14_8 | 26061 | 27680 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000001607_14 | MGYG000001607_14_9 | 27714 | 29195 | + | 8.A.59.2.1 |
| TC | MGYG000001607_14 | MGYG000001607_14_10 | 29357 | 30355 | + | 3.A.1.2.1 |
| TC | MGYG000001607_14 | MGYG000001607_14_11 | 30469 | 31983 | + | 3.A.1.2.23 |
| TC | MGYG000001607_14 | MGYG000001607_14_12 | 31986 | 33050 | + | 3.A.1.2.14 |
| TC | MGYG000001607_14 | MGYG000001607_14_13 | 33052 | 34095 | + | 3.A.1.2.14 |
Gene ID: MGYG000001607_14_1
Type: CAZyme
Location: 386 - 4615 (+)
Type: CAZyme
Location: 386 - 4615 (+)
Gene ID: MGYG000001607_14_2
Type: CAZyme
Location: 4867 - 11154 (+)
Type: CAZyme
Location: 4867 - 11154 (+)
Gene ID: MGYG000001607_14_3
Type: CAZyme
Location: 11158 - 13080 (+)
Type: CAZyme
Location: 11158 - 13080 (+)
Gene ID: MGYG000001607_14_4
Type: pfam
Location: 13109 - 16042 (+)
Type: pfam
Location: 13109 - 16042 (+)
Gene ID: MGYG000001607_14_5
Type: CAZyme
Location: 16234 - 20454 (+)
Type: CAZyme
Location: 16234 - 20454 (+)
Gene ID: MGYG000001607_14_6
Type: CAZyme
Location: 20580 - 24722 (+)
Type: CAZyme
Location: 20580 - 24722 (+)
Gene ID: MGYG000001607_14_7
Type: TC
Location: 24928 - 25992 (+)
Type: TC
Location: 24928 - 25992 (+)
Gene ID: MGYG000001607_14_8
Type: TF
Location: 26061 - 27680 (+)
Type: TF
Location: 26061 - 27680 (+)
Gene ID: MGYG000001607_14_9
Type: TC
Location: 27714 - 29195 (+)
Type: TC
Location: 27714 - 29195 (+)
Gene ID: MGYG000001607_14_10
Type: TC
Location: 29357 - 30355 (+)
Type: TC
Location: 29357 - 30355 (+)
Gene ID: MGYG000001607_14_11
Type: TC
Location: 30469 - 31983 (+)
Type: TC
Location: 30469 - 31983 (+)
Gene ID: MGYG000001607_14_12
Type: TC
Location: 31986 - 33050 (+)
Type: TC
Location: 31986 - 33050 (+)
Gene ID: MGYG000001607_14_13
Type: TC
Location: 33052 - 34095 (+)
Type: TC
Location: 33052 - 34095 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_B
Species
Dorea_B phocaeensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001607_14_10 | vegetarian > vegan | 1.11759 | 0.01882 |