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Cluster: MGYG000001602_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001602_12 MGYG000001602_12_13 10058 12193 + GH3
pfam MGYG000001602_12 MGYG000001602_12_14 12425 13729 + Peripla_BP_4 | Peripla_BP_7
TC MGYG000001602_12 MGYG000001602_12_15 13884 15392 + 3.A.1.2.3
TC MGYG000001602_12 MGYG000001602_12_16 15411 17066 + 3.A.1.2.3
TF MGYG000001602_12 MGYG000001602_12_17 17171 18781 + HTH_AraC | HTH_AraC
TC MGYG000001602_12 MGYG000001602_12_18 18771 20606 + 8.A.59.2.1
STP MGYG000001602_12 MGYG000001602_12_19 20621 21577 + Peripla_BP_1
TC MGYG000001602_12 MGYG000001602_12_20 21591 22634 + 3.A.1.2.3
CAZyme MGYG000001602_12 MGYG000001602_12_21 22738 23889 + CE4
Gene ID: MGYG000001602_12_13
Type: CAZyme
Location: 10058 - 12193 (+)
Gene ID: MGYG000001602_12_14
Type: pfam
Location: 12425 - 13729 (+)
Gene ID: MGYG000001602_12_15
Type: TC
Location: 13884 - 15392 (+)
Gene ID: MGYG000001602_12_16
Type: TC
Location: 15411 - 17066 (+)
Gene ID: MGYG000001602_12_17
Type: TF
Location: 17171 - 18781 (+)
Gene ID: MGYG000001602_12_18
Type: TC
Location: 18771 - 20606 (+)
Gene ID: MGYG000001602_12_19
Type: STP
Location: 20621 - 21577 (+)
Gene ID: MGYG000001602_12_20
Type: TC
Location: 21591 - 22634 (+)
Gene ID: MGYG000001602_12_21
Type: CAZyme
Location: 22738 - 23889 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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