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Cluster: MGYG000001602_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001602_54 MGYG000001602_54_2 898 2640 + 3.A.1.106.12
TC MGYG000001602_54 MGYG000001602_54_3 2637 4286 + 3.A.1.106.11
TC MGYG000001602_54 MGYG000001602_54_4 4464 5060 - 2.A.115.2.14
pfam MGYG000001602_54 MGYG000001602_54_5 5298 6854 + LytR_cpsA_psr
NULL(UNKNOWN) MGYG000001602_54 MGYG000001602_54_6 6892 7008 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001602_54 MGYG000001602_54_7 7277 8893 + 2.A.35.2.1
CAZyme MGYG000001602_54 MGYG000001602_54_8 9021 11186 + GH112
TF MGYG000001602_54 MGYG000001602_54_9 11215 12048 - HTH_AraC | HTH_AraC
TC MGYG000001602_54 MGYG000001602_54_10 12041 13411 - 2.A.66.1.13
Gene ID: MGYG000001602_54_2
Type: TC
Location: 898 - 2640 (+)
Gene ID: MGYG000001602_54_3
Type: TC
Location: 2637 - 4286 (+)
Gene ID: MGYG000001602_54_4
Type: TC
Location: 4464 - 5060 (-)
Gene ID: MGYG000001602_54_5
Type: pfam
Location: 5298 - 6854 (+)
Gene ID: MGYG000001602_54_6
Type:
Location: 6892 - 7008 (+)
Gene ID: MGYG000001602_54_7
Type: TC
Location: 7277 - 8893 (+)
Gene ID: MGYG000001602_54_8
Type: CAZyme
Location: 9021 - 11186 (+)
Gene ID: MGYG000001602_54_9
Type: TF
Location: 11215 - 12048 (-)
Gene ID: MGYG000001602_54_10
Type: TC
Location: 12041 - 13411 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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