Cluster: MGYG000001599_CGC4
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001599
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001599_1 | MGYG000001599_1_52 | 95741 | 97012 | + | 2.A.1.7.18 |
| pfam | MGYG000001599_1 | MGYG000001599_1_53 | 96983 | 98059 | - | NAD_synthase | ThiI | tRNA_Me_trans | QueC | tRNA_Me_trans_C | tRNA_Me_trans_M |
| TF | MGYG000001599_1 | MGYG000001599_1_54 | 98266 | 99099 | - | HTH_AraC |
| TC | MGYG000001599_1 | MGYG000001599_1_55 | 99242 | 99802 | + | 2.A.6.2.9 |
| TC | MGYG000001599_1 | MGYG000001599_1_56 | 99844 | 103041 | + | 2.A.6.2.22 |
| TC | MGYG000001599_1 | MGYG000001599_1_57 | 103060 | 104424 | + | 2.A.6.2.23 |
| pfam | MGYG000001599_1 | MGYG000001599_1_58 | 104724 | 105938 | + | AAA_21 |
| TC | MGYG000001599_1 | MGYG000001599_1_59 | 106370 | 109624 | + | 1.B.14.6.1 |
| pfam | MGYG000001599_1 | MGYG000001599_1_60 | 109803 | 111590 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000001599_1 | MGYG000001599_1_61 | 111606 | 114005 | + | DUF5123 |
| CAZyme | MGYG000001599_1 | MGYG000001599_1_62 | 114028 | 115749 | + | CE8 |
| NULL(UNKNOWN) | MGYG000001599_1 | MGYG000001599_1_63 | 115716 | 115895 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001599_1 | MGYG000001599_1_64 | 115932 | 117545 | + | PL1_2 |
| CAZyme | MGYG000001599_1 | MGYG000001599_1_65 | 117559 | 119025 | + | PL1_2 |
| CAZyme | MGYG000001599_1 | MGYG000001599_1_66 | 119143 | 120711 | + | GH28 |
| pfam | MGYG000001599_1 | MGYG000001599_1_67 | 120884 | 122062 | + | DUF4861 |
| CAZyme | MGYG000001599_1 | MGYG000001599_1_68 | 122089 | 123765 | + | CBM91 | GH43_10 |
Gene ID: MGYG000001599_1_52
Type: TC
Location: 95741 - 97012 (+)
Type: TC
Location: 95741 - 97012 (+)
Gene ID: MGYG000001599_1_53
Type: pfam
Location: 96983 - 98059 (-)
Type: pfam
Location: 96983 - 98059 (-)
Gene ID: MGYG000001599_1_54
Type: TF
Location: 98266 - 99099 (-)
Type: TF
Location: 98266 - 99099 (-)
Gene ID: MGYG000001599_1_55
Type: TC
Location: 99242 - 99802 (+)
Type: TC
Location: 99242 - 99802 (+)
Gene ID: MGYG000001599_1_56
Type: TC
Location: 99844 - 103041 (+)
Type: TC
Location: 99844 - 103041 (+)
Gene ID: MGYG000001599_1_57
Type: TC
Location: 103060 - 104424 (+)
Type: TC
Location: 103060 - 104424 (+)
Gene ID: MGYG000001599_1_58
Type: pfam
Location: 104724 - 105938 (+)
Type: pfam
Location: 104724 - 105938 (+)
Gene ID: MGYG000001599_1_59
Type: TC
Location: 106370 - 109624 (+)
Type: TC
Location: 106370 - 109624 (+)
Gene ID: MGYG000001599_1_60
Type: pfam
Location: 109803 - 111590 (+)
Type: pfam
Location: 109803 - 111590 (+)
Gene ID: MGYG000001599_1_61
Type: pfam
Location: 111606 - 114005 (+)
Type: pfam
Location: 111606 - 114005 (+)
Gene ID: MGYG000001599_1_62
Type: CAZyme
Location: 114028 - 115749 (+)
Type: CAZyme
Location: 114028 - 115749 (+)
Gene ID: MGYG000001599_1_63
Type:
Location: 115716 - 115895 (-)
Type:
Location: 115716 - 115895 (-)
Gene ID: MGYG000001599_1_64
Type: CAZyme
Location: 115932 - 117545 (+)
Type: CAZyme
Location: 115932 - 117545 (+)
Gene ID: MGYG000001599_1_65
Type: CAZyme
Location: 117559 - 119025 (+)
Type: CAZyme
Location: 117559 - 119025 (+)
Gene ID: MGYG000001599_1_66
Type: CAZyme
Location: 119143 - 120711 (+)
Type: CAZyme
Location: 119143 - 120711 (+)
Gene ID: MGYG000001599_1_67
Type: pfam
Location: 120884 - 122062 (+)
Type: pfam
Location: 120884 - 122062 (+)
Gene ID: MGYG000001599_1_68
Type: CAZyme
Location: 122089 - 123765 (+)
Type: CAZyme
Location: 122089 - 123765 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900544075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.