Cluster: MGYG000001599_CGC14
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: MGYG000001599
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001599_3 | MGYG000001599_3_135 | 168749 | 170338 | - | GH16_3 |
| NULL(UNKNOWN) | MGYG000001599_3 | MGYG000001599_3_136 | 170390 | 170755 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000001599_3 | MGYG000001599_3_137 | 170757 | 171587 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001599_3 | MGYG000001599_3_138 | 171608 | 172723 | - | GH43_24 |
| pfam | MGYG000001599_3 | MGYG000001599_3_139 | 172735 | 174426 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001599_3 | MGYG000001599_3_140 | 174470 | 177211 | - | 1.B.14.6.1 |
| pfam | MGYG000001599_3 | MGYG000001599_3_141 | 177230 | 179107 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001599_3 | MGYG000001599_3_142 | 179119 | 182244 | - | 1.B.14.6.1 |
Gene ID: MGYG000001599_3_135
Type: CAZyme
Location: 168749 - 170338 (-)
Type: CAZyme
Location: 168749 - 170338 (-)
Gene ID: MGYG000001599_3_136
Type:
Location: 170390 - 170755 (-)
Type:
Location: 170390 - 170755 (-)
Gene ID: MGYG000001599_3_137
Type:
Location: 170757 - 171587 (-)
Type:
Location: 170757 - 171587 (-)
Gene ID: MGYG000001599_3_138
Type: CAZyme
Location: 171608 - 172723 (-)
Type: CAZyme
Location: 171608 - 172723 (-)
Gene ID: MGYG000001599_3_139
Type: pfam
Location: 172735 - 174426 (-)
Type: pfam
Location: 172735 - 174426 (-)
Gene ID: MGYG000001599_3_140
Type: TC
Location: 174470 - 177211 (-)
Type: TC
Location: 174470 - 177211 (-)
Gene ID: MGYG000001599_3_141
Type: pfam
Location: 177230 - 179107 (-)
Type: pfam
Location: 177230 - 179107 (-)
Gene ID: MGYG000001599_3_142
Type: TC
Location: 179119 - 182244 (-)
Type: TC
Location: 179119 - 182244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900544075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.