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Cluster: MGYG000001596_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001596_4 MGYG000001596_4_24 27229 27990 + 3.A.1.134.2
TC MGYG000001596_4 MGYG000001596_4_25 27987 30032 + 3.A.1.134.4
TF MGYG000001596_4 MGYG000001596_4_26 29992 31518 - HTH_AraC
TC MGYG000001596_4 MGYG000001596_4_27 31523 33310 - 8.A.59.2.1
STP MGYG000001596_4 MGYG000001596_4_28 33548 34852 + SBP_bac_1
NULL(UNKNOWN) MGYG000001596_4 MGYG000001596_4_29 34809 35060 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001596_4 MGYG000001596_4_30 35084 35986 + 3.A.1.1.11
TC MGYG000001596_4 MGYG000001596_4_31 35992 36837 + 3.A.1.1.11
CAZyme MGYG000001596_4 MGYG000001596_4_32 36847 38832 + GH67
Gene ID: MGYG000001596_4_24
Type: TC
Location: 27229 - 27990 (+)
Gene ID: MGYG000001596_4_25
Type: TC
Location: 27987 - 30032 (+)
Gene ID: MGYG000001596_4_26
Type: TF
Location: 29992 - 31518 (-)
Gene ID: MGYG000001596_4_27
Type: TC
Location: 31523 - 33310 (-)
Gene ID: MGYG000001596_4_28
Type: STP
Location: 33548 - 34852 (+)
Gene ID: MGYG000001596_4_29
Type:
Location: 34809 - 35060 (+)
Gene ID: MGYG000001596_4_30
Type: TC
Location: 35084 - 35986 (+)
Gene ID: MGYG000001596_4_31
Type: TC
Location: 35992 - 36837 (+)
Gene ID: MGYG000001596_4_32
Type: CAZyme
Location: 36847 - 38832 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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