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Cluster: MGYG000001596_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001596_10 MGYG000001596_10_18 15416 16480 + GT28
STP MGYG000001596_10 MGYG000001596_10_19 16469 17038 - Sigma70_r2
pfam MGYG000001596_10 MGYG000001596_10_20 17056 17463 - HIT | DcpS_C
TC MGYG000001596_10 MGYG000001596_10_21 17617 18345 + 2.A.21.9.1
TC MGYG000001596_10 MGYG000001596_10_22 18331 18960 - 9.B.104.1.3
peptidase MGYG000001596_10 MGYG000001596_10_23 19434 19892 + A24.UNA
NULL(UNKNOWN) MGYG000001596_10 MGYG000001596_10_24 19889 20890 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001596_10 MGYG000001596_10_25 20883 22085 + 9.A.47.2.1
pfam MGYG000001596_10 MGYG000001596_10_26 22069 22872 + T2SSF
NULL(UNKNOWN) MGYG000001596_10 MGYG000001596_10_27 22862 24085 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001596_10 MGYG000001596_10_28 24114 24281 + 1.E.52.1.1
Gene ID: MGYG000001596_10_18
Type: CAZyme
Location: 15416 - 16480 (+)
Gene ID: MGYG000001596_10_19
Type: STP
Location: 16469 - 17038 (-)
Gene ID: MGYG000001596_10_20
Type: pfam
Location: 17056 - 17463 (-)
Gene ID: MGYG000001596_10_21
Type: TC
Location: 17617 - 18345 (+)
Gene ID: MGYG000001596_10_22
Type: TC
Location: 18331 - 18960 (-)
Gene ID: MGYG000001596_10_23
Type: peptidase
Location: 19434 - 19892 (+)
Gene ID: MGYG000001596_10_24
Type:
Location: 19889 - 20890 (+)
Gene ID: MGYG000001596_10_25
Type: TC
Location: 20883 - 22085 (+)
Gene ID: MGYG000001596_10_26
Type: pfam
Location: 22069 - 22872 (+)
Gene ID: MGYG000001596_10_27
Type:
Location: 22862 - 24085 (+)
Gene ID: MGYG000001596_10_28
Type: TC
Location: 24114 - 24281 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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