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Cluster: MGYG000001592_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001592_13 MGYG000001592_13_13 10544 11392 + 3.A.1.8.1
TC MGYG000001592_13 MGYG000001592_13_14 11875 12543 + 3.A.1.8.1
TC MGYG000001592_13 MGYG000001592_13_15 12540 13577 + 3.A.1.10.2
pfam MGYG000001592_13 MGYG000001592_13_16 13723 15327 + TED
pfam MGYG000001592_13 MGYG000001592_13_17 15399 16958 - SLH | SLH | LRR_5 | LRR_5
CAZyme MGYG000001592_13 MGYG000001592_13_18 17069 18049 - CBM50 | CBM50 | GH25
TF MGYG000001592_13 MGYG000001592_13_19 18101 18547 - HTH_3
TC MGYG000001592_13 MGYG000001592_13_20 19326 20684 + 2.A.40.2.1
Gene ID: MGYG000001592_13_13
Type: TC
Location: 10544 - 11392 (+)
Gene ID: MGYG000001592_13_14
Type: TC
Location: 11875 - 12543 (+)
Gene ID: MGYG000001592_13_15
Type: TC
Location: 12540 - 13577 (+)
Gene ID: MGYG000001592_13_16
Type: pfam
Location: 13723 - 15327 (+)
Gene ID: MGYG000001592_13_17
Type: pfam
Location: 15399 - 16958 (-)
Gene ID: MGYG000001592_13_18
Type: CAZyme
Location: 17069 - 18049 (-)
Gene ID: MGYG000001592_13_19
Type: TF
Location: 18101 - 18547 (-)
Gene ID: MGYG000001592_13_20
Type: TC
Location: 19326 - 20684 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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