Cluster: MGYG000001591_CGC9
🧬 Cluster Details
- Gene Count: 24
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000001591
- CGC Family ID: CGCFAM_06325
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001591_2 | MGYG000001591_2_94 | 128648 | 129859 | - | 3.D.2.4.1 |
| STP | MGYG000001591_2 | MGYG000001591_2_95 | 129908 | 130429 | - | SKI |
| pfam | MGYG000001591_2 | MGYG000001591_2_96 | 130564 | 131199 | + | RNase_H | Cauli_VI |
| CAZyme | MGYG000001591_2 | MGYG000001591_2_97 | 131211 | 132230 | + | GT90 |
| NULL(UNKNOWN) | MGYG000001591_2 | MGYG000001591_2_98 | 132227 | 133084 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001591_2 | MGYG000001591_2_99 | 133110 | 134402 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | MGYG000001591_2 | MGYG000001591_2_100 | 134611 | 135321 | + | GT2 |
| CAZyme | MGYG000001591_2 | MGYG000001591_2_101 | 135318 | 136118 | + | CE4 |
| pfam | MGYG000001591_2 | MGYG000001591_2_102 | 136115 | 137299 | + | GT87 |
| CAZyme | MGYG000001591_2 | MGYG000001591_2_103 | 137491 | 138624 | + | GT4 |
| pfam | MGYG000001591_2 | MGYG000001591_2_104 | 138694 | 139518 | + | Methyltransf_21 |
| pfam | MGYG000001591_2 | MGYG000001591_2_105 | 139515 | 140462 | - | Kdo |
| CAZyme | MGYG000001591_2 | MGYG000001591_2_106 | 140472 | 141500 | - | GT9 |
| pfam | MGYG000001591_2 | MGYG000001591_2_107 | 141500 | 142105 | - | DUF4254 |
| CAZyme | MGYG000001591_2 | MGYG000001591_2_108 | 142182 | 143279 | - | GH43_33 |
| TC | MGYG000001591_2 | MGYG000001591_2_109 | 143471 | 144943 | - | 8.A.46.3.3 |
| TC | MGYG000001591_2 | MGYG000001591_2_110 | 144965 | 148075 | - | 1.B.14.6.1 |
| pfam | MGYG000001591_2 | MGYG000001591_2_111 | 148607 | 149710 | + | 2-Hacid_dh | 2-Hacid_dh_C | DUF3410 |
| NULL(UNKNOWN) | MGYG000001591_2 | MGYG000001591_2_112 | 149724 | 149849 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001591_2 | MGYG000001591_2_113 | 149987 | 151186 | + | 2.A.1.46.5 |
| CAZyme | MGYG000001591_2 | MGYG000001591_2_114 | 151194 | 152438 | - | GT1 |
| NULL(UNKNOWN) | MGYG000001591_2 | MGYG000001591_2_115 | 152477 | 152650 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001591_2 | MGYG000001591_2_116 | 152853 | 154031 | + | DUF4925 |
| TC | MGYG000001591_2 | MGYG000001591_2_117 | 154050 | 156866 | + | 1.B.14.10.1 |
Gene ID: MGYG000001591_2_94
Type: TC
Location: 128648 - 129859 (-)
Type: TC
Location: 128648 - 129859 (-)
Gene ID: MGYG000001591_2_95
Type: STP
Location: 129908 - 130429 (-)
Type: STP
Location: 129908 - 130429 (-)
Gene ID: MGYG000001591_2_96
Type: pfam
Location: 130564 - 131199 (+)
Type: pfam
Location: 130564 - 131199 (+)
Gene ID: MGYG000001591_2_97
Type: CAZyme
Location: 131211 - 132230 (+)
Type: CAZyme
Location: 131211 - 132230 (+)
Gene ID: MGYG000001591_2_98
Type:
Location: 132227 - 133084 (-)
Type:
Location: 132227 - 133084 (-)
Gene ID: MGYG000001591_2_99
Type: pfam
Location: 133110 - 134402 (-)
Type: pfam
Location: 133110 - 134402 (-)
Gene ID: MGYG000001591_2_100
Type: CAZyme
Location: 134611 - 135321 (+)
Type: CAZyme
Location: 134611 - 135321 (+)
Gene ID: MGYG000001591_2_101
Type: CAZyme
Location: 135318 - 136118 (+)
Type: CAZyme
Location: 135318 - 136118 (+)
Gene ID: MGYG000001591_2_102
Type: pfam
Location: 136115 - 137299 (+)
Type: pfam
Location: 136115 - 137299 (+)
Gene ID: MGYG000001591_2_103
Type: CAZyme
Location: 137491 - 138624 (+)
Type: CAZyme
Location: 137491 - 138624 (+)
Gene ID: MGYG000001591_2_104
Type: pfam
Location: 138694 - 139518 (+)
Type: pfam
Location: 138694 - 139518 (+)
Gene ID: MGYG000001591_2_105
Type: pfam
Location: 139515 - 140462 (-)
Type: pfam
Location: 139515 - 140462 (-)
Gene ID: MGYG000001591_2_106
Type: CAZyme
Location: 140472 - 141500 (-)
Type: CAZyme
Location: 140472 - 141500 (-)
Gene ID: MGYG000001591_2_107
Type: pfam
Location: 141500 - 142105 (-)
Type: pfam
Location: 141500 - 142105 (-)
Gene ID: MGYG000001591_2_108
Type: CAZyme
Location: 142182 - 143279 (-)
Type: CAZyme
Location: 142182 - 143279 (-)
Gene ID: MGYG000001591_2_109
Type: TC
Location: 143471 - 144943 (-)
Type: TC
Location: 143471 - 144943 (-)
Gene ID: MGYG000001591_2_110
Type: TC
Location: 144965 - 148075 (-)
Type: TC
Location: 144965 - 148075 (-)
Gene ID: MGYG000001591_2_111
Type: pfam
Location: 148607 - 149710 (+)
Type: pfam
Location: 148607 - 149710 (+)
Gene ID: MGYG000001591_2_112
Type:
Location: 149724 - 149849 (+)
Type:
Location: 149724 - 149849 (+)
Gene ID: MGYG000001591_2_113
Type: TC
Location: 149987 - 151186 (+)
Type: TC
Location: 149987 - 151186 (+)
Gene ID: MGYG000001591_2_114
Type: CAZyme
Location: 151194 - 152438 (-)
Type: CAZyme
Location: 151194 - 152438 (-)
Gene ID: MGYG000001591_2_115
Type:
Location: 152477 - 152650 (-)
Type:
Location: 152477 - 152650 (-)
Gene ID: MGYG000001591_2_116
Type: pfam
Location: 152853 - 154031 (+)
Type: pfam
Location: 152853 - 154031 (+)
Gene ID: MGYG000001591_2_117
Type: TC
Location: 154050 - 156866 (+)
Type: TC
Location: 154050 - 156866 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.