Cluster: MGYG000001591_CGC82
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000001591
- CGC Family ID: CGCFAM_04943
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001591_57 | MGYG000001591_57_14 | 18728 | 20050 | - | 2.A.35.1.5 |
| TC | MGYG000001591_57 | MGYG000001591_57_15 | 20081 | 22666 | - | 1.B.14.6.14 |
| pfam | MGYG000001591_57 | MGYG000001591_57_16 | 22844 | 23191 | + | Gp49 |
| TF | MGYG000001591_57 | MGYG000001591_57_17 | 23188 | 23520 | + | HTH_3 |
| CAZyme | MGYG000001591_57 | MGYG000001591_57_18 | 23569 | 26169 | - | GH2 |
| TC | MGYG000001591_57 | MGYG000001591_57_19 | 26192 | 28093 | - | 4.C.1.1.14 |
| pfam | MGYG000001591_57 | MGYG000001591_57_20 | 28106 | 31453 | - | DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter |
| CAZyme | MGYG000001591_57 | MGYG000001591_57_21 | 31687 | 32424 | + | GT2 |
| CAZyme | MGYG000001591_57 | MGYG000001591_57_22 | 32435 | 34618 | + | PL30 | PL8 |
| CAZyme | MGYG000001591_57 | MGYG000001591_57_23 | 34744 | 37899 | + | GH106 |
| peptidase | MGYG000001591_57 | MGYG000001591_57_24 | 37964 | 39304 | + | M38.UNW |
| TC | MGYG000001591_57 | MGYG000001591_57_25 | 39308 | 40666 | + | 2.A.66.1.32 |
Gene ID: MGYG000001591_57_14
Type: TC
Location: 18728 - 20050 (-)
Type: TC
Location: 18728 - 20050 (-)
Gene ID: MGYG000001591_57_15
Type: TC
Location: 20081 - 22666 (-)
Type: TC
Location: 20081 - 22666 (-)
Gene ID: MGYG000001591_57_16
Type: pfam
Location: 22844 - 23191 (+)
Type: pfam
Location: 22844 - 23191 (+)
Gene ID: MGYG000001591_57_17
Type: TF
Location: 23188 - 23520 (+)
Type: TF
Location: 23188 - 23520 (+)
Gene ID: MGYG000001591_57_18
Type: CAZyme
Location: 23569 - 26169 (-)
Type: CAZyme
Location: 23569 - 26169 (-)
Gene ID: MGYG000001591_57_19
Type: TC
Location: 26192 - 28093 (-)
Type: TC
Location: 26192 - 28093 (-)
Gene ID: MGYG000001591_57_20
Type: pfam
Location: 28106 - 31453 (-)
Type: pfam
Location: 28106 - 31453 (-)
Gene ID: MGYG000001591_57_21
Type: CAZyme
Location: 31687 - 32424 (+)
Type: CAZyme
Location: 31687 - 32424 (+)
Gene ID: MGYG000001591_57_22
Type: CAZyme
Location: 32435 - 34618 (+)
Type: CAZyme
Location: 32435 - 34618 (+)
Gene ID: MGYG000001591_57_23
Type: CAZyme
Location: 34744 - 37899 (+)
Type: CAZyme
Location: 34744 - 37899 (+)
Gene ID: MGYG000001591_57_24
Type: peptidase
Location: 37964 - 39304 (+)
Type: peptidase
Location: 37964 - 39304 (+)
Gene ID: MGYG000001591_57_25
Type: TC
Location: 39308 - 40666 (+)
Type: TC
Location: 39308 - 40666 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.