Cluster: MGYG000001591_CGC60
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001591
- CGC Family ID: CGCFAM_02028
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001591_34 | MGYG000001591_34_1 | 3 | 1916 | + | GH20 |
| pfam | MGYG000001591_34 | MGYG000001591_34_2 | 2158 | 2982 | + | DUF5032 |
| CAZyme | MGYG000001591_34 | MGYG000001591_34_3 | 3163 | 4368 | + | PL38 |
| CAZyme | MGYG000001591_34 | MGYG000001591_34_4 | 4419 | 5663 | + | GH88 |
| CAZyme | MGYG000001591_34 | MGYG000001591_34_5 | 5693 | 8161 | + | GH2 |
| TF | MGYG000001591_34 | MGYG000001591_34_6 | 8404 | 12507 | + | HTH_AraC |
| TC | MGYG000001591_34 | MGYG000001591_34_7 | 12676 | 15813 | + | 1.B.14.6.1 |
| pfam | MGYG000001591_34 | MGYG000001591_34_8 | 15830 | 17311 | + | SusD_RagB | SusD-like_3 |
| TC | MGYG000001591_34 | MGYG000001591_34_9 | 17412 | 21395 | + | 9.A.25.1.1 |
| CAZyme | MGYG000001591_34 | MGYG000001591_34_10 | 21433 | 22959 | + | PL29 |
| pfam | MGYG000001591_34 | MGYG000001591_34_11 | 23035 | 24681 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001591_34 | MGYG000001591_34_12 | 24701 | 28171 | - | 1.B.14.6.1 |
Gene ID: MGYG000001591_34_1
Type: CAZyme
Location: 3 - 1916 (+)
Type: CAZyme
Location: 3 - 1916 (+)
Gene ID: MGYG000001591_34_2
Type: pfam
Location: 2158 - 2982 (+)
Type: pfam
Location: 2158 - 2982 (+)
Gene ID: MGYG000001591_34_3
Type: CAZyme
Location: 3163 - 4368 (+)
Type: CAZyme
Location: 3163 - 4368 (+)
Gene ID: MGYG000001591_34_4
Type: CAZyme
Location: 4419 - 5663 (+)
Type: CAZyme
Location: 4419 - 5663 (+)
Gene ID: MGYG000001591_34_5
Type: CAZyme
Location: 5693 - 8161 (+)
Type: CAZyme
Location: 5693 - 8161 (+)
Gene ID: MGYG000001591_34_6
Type: TF
Location: 8404 - 12507 (+)
Type: TF
Location: 8404 - 12507 (+)
Gene ID: MGYG000001591_34_7
Type: TC
Location: 12676 - 15813 (+)
Type: TC
Location: 12676 - 15813 (+)
Gene ID: MGYG000001591_34_8
Type: pfam
Location: 15830 - 17311 (+)
Type: pfam
Location: 15830 - 17311 (+)
Gene ID: MGYG000001591_34_9
Type: TC
Location: 17412 - 21395 (+)
Type: TC
Location: 17412 - 21395 (+)
Gene ID: MGYG000001591_34_10
Type: CAZyme
Location: 21433 - 22959 (+)
Type: CAZyme
Location: 21433 - 22959 (+)
Gene ID: MGYG000001591_34_11
Type: pfam
Location: 23035 - 24681 (-)
Type: pfam
Location: 23035 - 24681 (-)
Gene ID: MGYG000001591_34_12
Type: TC
Location: 24701 - 28171 (-)
Type: TC
Location: 24701 - 28171 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.