Cluster: MGYG000001591_CGC58
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001591
- CGC Family ID: CGCFAM_07228
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001591_32 | MGYG000001591_32_25 | 38701 | 41811 | + | 1.B.14.6.1 |
| pfam | MGYG000001591_32 | MGYG000001591_32_26 | 41824 | 43758 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000001591_32 | MGYG000001591_32_27 | 43872 | 44570 | + | LANC_like |
| CAZyme | MGYG000001591_32 | MGYG000001591_32_28 | 44567 | 45802 | + | GT4 |
| pfam | MGYG000001591_32 | MGYG000001591_32_29 | 45820 | 47388 | + | VKOR | Thioredoxin_4 |
| NULL(UNKNOWN) | MGYG000001591_32 | MGYG000001591_32_30 | 47494 | 47706 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001591_32 | MGYG000001591_32_31 | 47748 | 49952 | + | 3.A.1.112.9 |
| NULL(UNKNOWN) | MGYG000001591_32 | MGYG000001591_32_32 | 49952 | 50065 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001591_32 | MGYG000001591_32_33 | 50085 | 51251 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | MGYG000001591_32 | MGYG000001591_32_34 | 51283 | 54381 | + | GH2 |
| TC | MGYG000001591_32 | MGYG000001591_32_35 | 54536 | 56119 | + | 9.A.25.1.1 |
| CAZyme | MGYG000001591_32 | MGYG000001591_32_36 | 56165 | 57550 | + | GH177 |
Gene ID: MGYG000001591_32_25
Type: TC
Location: 38701 - 41811 (+)
Type: TC
Location: 38701 - 41811 (+)
Gene ID: MGYG000001591_32_26
Type: pfam
Location: 41824 - 43758 (+)
Type: pfam
Location: 41824 - 43758 (+)
Gene ID: MGYG000001591_32_27
Type: pfam
Location: 43872 - 44570 (+)
Type: pfam
Location: 43872 - 44570 (+)
Gene ID: MGYG000001591_32_28
Type: CAZyme
Location: 44567 - 45802 (+)
Type: CAZyme
Location: 44567 - 45802 (+)
Gene ID: MGYG000001591_32_29
Type: pfam
Location: 45820 - 47388 (+)
Type: pfam
Location: 45820 - 47388 (+)
Gene ID: MGYG000001591_32_30
Type:
Location: 47494 - 47706 (+)
Type:
Location: 47494 - 47706 (+)
Gene ID: MGYG000001591_32_31
Type: TC
Location: 47748 - 49952 (+)
Type: TC
Location: 47748 - 49952 (+)
Gene ID: MGYG000001591_32_32
Type:
Location: 49952 - 50065 (+)
Type:
Location: 49952 - 50065 (+)
Gene ID: MGYG000001591_32_33
Type: pfam
Location: 50085 - 51251 (+)
Type: pfam
Location: 50085 - 51251 (+)
Gene ID: MGYG000001591_32_34
Type: CAZyme
Location: 51283 - 54381 (+)
Type: CAZyme
Location: 51283 - 54381 (+)
Gene ID: MGYG000001591_32_35
Type: TC
Location: 54536 - 56119 (+)
Type: TC
Location: 54536 - 56119 (+)
Gene ID: MGYG000001591_32_36
Type: CAZyme
Location: 56165 - 57550 (+)
Type: CAZyme
Location: 56165 - 57550 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.