Cluster: MGYG000001591_CGC32
🧬 Cluster Details
- Gene Count: 23
- CAZyme Count: 14
- Substrate:
- Genome ID: MGYG000001591
- CGC Family ID: CGCFAM_02931
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001591_11 | MGYG000001591_11_24 | 28212 | 30101 | - | GH120 |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_25 | 30346 | 33243 | - | GH38 |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_26 | 33355 | 35724 | - | GH3 |
| TF | MGYG000001591_11 | MGYG000001591_11_27 | 35795 | 36733 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | MGYG000001591_11 | MGYG000001591_11_28 | 36857 | 38962 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_29 | 38983 | 41220 | - | GH182 |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_30 | 41373 | 43295 | - | GH97 |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_31 | 43328 | 45469 | - | GH141 |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_32 | 45503 | 47287 | - | GH163 |
| NULL(UNKNOWN) | MGYG000001591_11 | MGYG000001591_11_33 | 47428 | 49494 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_34 | 49588 | 51831 | - | GH139 |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_35 | 51867 | 54368 | - | GH141 |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_36 | 54365 | 56455 | - | GH139 |
| pfam | MGYG000001591_11 | MGYG000001591_11_37 | 56741 | 58468 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | MGYG000001591_11 | MGYG000001591_11_38 | 58468 | 61902 | - | 1.B.14.6.1 |
| STP | MGYG000001591_11 | MGYG000001591_11_39 | 62067 | 63068 | - | FecR |
| TF | MGYG000001591_11 | MGYG000001591_11_40 | 63159 | 63680 | - | GerE |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_41 | 63876 | 65981 | - | GH141 |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_42 | 66036 | 68399 | - | GH92 |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_43 | 68520 | 70394 | - | GH97 |
| CAZyme | MGYG000001591_11 | MGYG000001591_11_44 | 70446 | 72017 | - | GH20 |
| pfam | MGYG000001591_11 | MGYG000001591_11_45 | 72128 | 73837 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001591_11 | MGYG000001591_11_46 | 73852 | 77136 | - | 1.B.14.6.1 |
Gene ID: MGYG000001591_11_24
Type: CAZyme
Location: 28212 - 30101 (-)
Type: CAZyme
Location: 28212 - 30101 (-)
Gene ID: MGYG000001591_11_25
Type: CAZyme
Location: 30346 - 33243 (-)
Type: CAZyme
Location: 30346 - 33243 (-)
Gene ID: MGYG000001591_11_26
Type: CAZyme
Location: 33355 - 35724 (-)
Type: CAZyme
Location: 33355 - 35724 (-)
Gene ID: MGYG000001591_11_27
Type: TF
Location: 35795 - 36733 (+)
Type: TF
Location: 35795 - 36733 (+)
Gene ID: MGYG000001591_11_28
Type:
Location: 36857 - 38962 (-)
Type:
Location: 36857 - 38962 (-)
Gene ID: MGYG000001591_11_29
Type: CAZyme
Location: 38983 - 41220 (-)
Type: CAZyme
Location: 38983 - 41220 (-)
Gene ID: MGYG000001591_11_30
Type: CAZyme
Location: 41373 - 43295 (-)
Type: CAZyme
Location: 41373 - 43295 (-)
Gene ID: MGYG000001591_11_31
Type: CAZyme
Location: 43328 - 45469 (-)
Type: CAZyme
Location: 43328 - 45469 (-)
Gene ID: MGYG000001591_11_32
Type: CAZyme
Location: 45503 - 47287 (-)
Type: CAZyme
Location: 45503 - 47287 (-)
Gene ID: MGYG000001591_11_33
Type:
Location: 47428 - 49494 (-)
Type:
Location: 47428 - 49494 (-)
Gene ID: MGYG000001591_11_34
Type: CAZyme
Location: 49588 - 51831 (-)
Type: CAZyme
Location: 49588 - 51831 (-)
Gene ID: MGYG000001591_11_35
Type: CAZyme
Location: 51867 - 54368 (-)
Type: CAZyme
Location: 51867 - 54368 (-)
Gene ID: MGYG000001591_11_36
Type: CAZyme
Location: 54365 - 56455 (-)
Type: CAZyme
Location: 54365 - 56455 (-)
Gene ID: MGYG000001591_11_37
Type: pfam
Location: 56741 - 58468 (-)
Type: pfam
Location: 56741 - 58468 (-)
Gene ID: MGYG000001591_11_38
Type: TC
Location: 58468 - 61902 (-)
Type: TC
Location: 58468 - 61902 (-)
Gene ID: MGYG000001591_11_39
Type: STP
Location: 62067 - 63068 (-)
Type: STP
Location: 62067 - 63068 (-)
Gene ID: MGYG000001591_11_40
Type: TF
Location: 63159 - 63680 (-)
Type: TF
Location: 63159 - 63680 (-)
Gene ID: MGYG000001591_11_41
Type: CAZyme
Location: 63876 - 65981 (-)
Type: CAZyme
Location: 63876 - 65981 (-)
Gene ID: MGYG000001591_11_42
Type: CAZyme
Location: 66036 - 68399 (-)
Type: CAZyme
Location: 66036 - 68399 (-)
Gene ID: MGYG000001591_11_43
Type: CAZyme
Location: 68520 - 70394 (-)
Type: CAZyme
Location: 68520 - 70394 (-)
Gene ID: MGYG000001591_11_44
Type: CAZyme
Location: 70446 - 72017 (-)
Type: CAZyme
Location: 70446 - 72017 (-)
Gene ID: MGYG000001591_11_45
Type: pfam
Location: 72128 - 73837 (-)
Type: pfam
Location: 72128 - 73837 (-)
Gene ID: MGYG000001591_11_46
Type: TC
Location: 73852 - 77136 (-)
Type: TC
Location: 73852 - 77136 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.