Cluster: MGYG000001591_CGC21
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001591
- CGC Family ID: CGCFAM_01381
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001591_7 | MGYG000001591_7_19 | 22933 | 25050 | - | GH2 |
| TF | MGYG000001591_7 | MGYG000001591_7_20 | 25493 | 26086 | + | HTH_DeoR |
| TF | MGYG000001591_7 | MGYG000001591_7_21 | 26083 | 30168 | + | HTH_AraC |
| CAZyme | MGYG000001591_7 | MGYG000001591_7_22 | 30266 | 31390 | + | GH105 |
| TC | MGYG000001591_7 | MGYG000001591_7_23 | 31559 | 34594 | + | 1.B.14.6.1 |
| TC | MGYG000001591_7 | MGYG000001591_7_24 | 34616 | 36223 | + | 8.A.46.1.6 |
| NULL(UNKNOWN) | MGYG000001591_7 | MGYG000001591_7_25 | 36309 | 38582 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001591_7 | MGYG000001591_7_26 | 38615 | 41032 | + | GH3 |
| NULL(UNKNOWN) | MGYG000001591_7 | MGYG000001591_7_27 | 41022 | 41462 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001591_7 | MGYG000001591_7_28 | 41563 | 43047 | - | 8.A.46.1.3 |
| TC | MGYG000001591_7 | MGYG000001591_7_29 | 43072 | 46137 | - | 1.B.14.6.1 |
| TF | MGYG000001591_7 | MGYG000001591_7_30 | 46325 | 50425 | - | HTH_AraC |
| TC | MGYG000001591_7 | MGYG000001591_7_31 | 50578 | 53901 | + | 9.A.25.1.1 |
Gene ID: MGYG000001591_7_19
Type: CAZyme
Location: 22933 - 25050 (-)
Type: CAZyme
Location: 22933 - 25050 (-)
Gene ID: MGYG000001591_7_20
Type: TF
Location: 25493 - 26086 (+)
Type: TF
Location: 25493 - 26086 (+)
Gene ID: MGYG000001591_7_21
Type: TF
Location: 26083 - 30168 (+)
Type: TF
Location: 26083 - 30168 (+)
Gene ID: MGYG000001591_7_22
Type: CAZyme
Location: 30266 - 31390 (+)
Type: CAZyme
Location: 30266 - 31390 (+)
Gene ID: MGYG000001591_7_23
Type: TC
Location: 31559 - 34594 (+)
Type: TC
Location: 31559 - 34594 (+)
Gene ID: MGYG000001591_7_24
Type: TC
Location: 34616 - 36223 (+)
Type: TC
Location: 34616 - 36223 (+)
Gene ID: MGYG000001591_7_25
Type:
Location: 36309 - 38582 (+)
Type:
Location: 36309 - 38582 (+)
Gene ID: MGYG000001591_7_26
Type: CAZyme
Location: 38615 - 41032 (+)
Type: CAZyme
Location: 38615 - 41032 (+)
Gene ID: MGYG000001591_7_27
Type:
Location: 41022 - 41462 (+)
Type:
Location: 41022 - 41462 (+)
Gene ID: MGYG000001591_7_28
Type: TC
Location: 41563 - 43047 (-)
Type: TC
Location: 41563 - 43047 (-)
Gene ID: MGYG000001591_7_29
Type: TC
Location: 43072 - 46137 (-)
Type: TC
Location: 43072 - 46137 (-)
Gene ID: MGYG000001591_7_30
Type: TF
Location: 46325 - 50425 (-)
Type: TF
Location: 46325 - 50425 (-)
Gene ID: MGYG000001591_7_31
Type: TC
Location: 50578 - 53901 (+)
Type: TC
Location: 50578 - 53901 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.