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Cluster: MGYG000001590_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001590_5 MGYG000001590_5_5 5039 5860 + 3.A.1.103.5
TC MGYG000001590_5 MGYG000001590_5_6 5870 7117 + 3.A.1.103.5
pfam MGYG000001590_5 MGYG000001590_5_7 7135 8259 + Glyco_trans_1_2
pfam MGYG000001590_5 MGYG000001590_5_8 8252 8977 + Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
CAZyme MGYG000001590_5 MGYG000001590_5_9 8993 11347 + GT4
CAZyme MGYG000001590_5 MGYG000001590_5_10 11463 12533 + GT4
CAZyme MGYG000001590_5 MGYG000001590_5_11 12887 13984 + GT4
CAZyme MGYG000001590_5 MGYG000001590_5_12 14123 14956 + GT2
pfam MGYG000001590_5 MGYG000001590_5_13 14960 15796 + DUF5672
CAZyme MGYG000001590_5 MGYG000001590_5_14 15857 17542 + GT2 | GT2
Gene ID: MGYG000001590_5_5
Type: TC
Location: 5039 - 5860 (+)
Gene ID: MGYG000001590_5_6
Type: TC
Location: 5870 - 7117 (+)
Gene ID: MGYG000001590_5_7
Type: pfam
Location: 7135 - 8259 (+)
Gene ID: MGYG000001590_5_8
Type: pfam
Location: 8252 - 8977 (+)
Gene ID: MGYG000001590_5_9
Type: CAZyme
Location: 8993 - 11347 (+)
Gene ID: MGYG000001590_5_10
Type: CAZyme
Location: 11463 - 12533 (+)
Gene ID: MGYG000001590_5_11
Type: CAZyme
Location: 12887 - 13984 (+)
Gene ID: MGYG000001590_5_12
Type: CAZyme
Location: 14123 - 14956 (+)
Gene ID: MGYG000001590_5_13
Type: pfam
Location: 14960 - 15796 (+)
Gene ID: MGYG000001590_5_14
Type: CAZyme
Location: 15857 - 17542 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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