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Cluster: MGYG000001587_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001587_38 MGYG000001587_38_1 2 970 + GH1
TF MGYG000001587_38 MGYG000001587_38_2 1238 2275 - LacI
CAZyme MGYG000001587_38 MGYG000001587_38_3 2617 4059 + GH1
TC MGYG000001587_38 MGYG000001587_38_4 4236 5996 + 4.A.3.1.1
TF MGYG000001587_38 MGYG000001587_38_5 6335 7345 - LacI
TC MGYG000001587_38 MGYG000001587_38_6 7621 9399 + 4.A.3.1.1
CAZyme MGYG000001587_38 MGYG000001587_38_7 9475 10896 + GH1
STP MGYG000001587_38 MGYG000001587_38_8 11532 11927 - DeoRC
TC MGYG000001587_38 MGYG000001587_38_9 12090 13784 - 4.A.3.1.1
Gene ID: MGYG000001587_38_1
Type: CAZyme
Location: 2 - 970 (+)
Gene ID: MGYG000001587_38_2
Type: TF
Location: 1238 - 2275 (-)
Gene ID: MGYG000001587_38_3
Type: CAZyme
Location: 2617 - 4059 (+)
Gene ID: MGYG000001587_38_4
Type: TC
Location: 4236 - 5996 (+)
Gene ID: MGYG000001587_38_5
Type: TF
Location: 6335 - 7345 (-)
Gene ID: MGYG000001587_38_6
Type: TC
Location: 7621 - 9399 (+)
Gene ID: MGYG000001587_38_7
Type: CAZyme
Location: 9475 - 10896 (+)
Gene ID: MGYG000001587_38_8
Type: STP
Location: 11532 - 11927 (-)
Gene ID: MGYG000001587_38_9
Type: TC
Location: 12090 - 13784 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001587_38_2 vegetarian > omnivore 1.07795 0.02677

🧭 Explore Read Mapping of CGC

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