Cluster: MGYG000001587_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001587
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001587_22 | MGYG000001587_22_1 | 153 | 1469 | + | 3.A.1.1.45 |
| TC | MGYG000001587_22 | MGYG000001587_22_2 | 1557 | 2411 | + | 3.A.1.1.45 |
| TC | MGYG000001587_22 | MGYG000001587_22_3 | 2411 | 3250 | + | 3.A.1.1.45 |
| TC | MGYG000001587_22 | MGYG000001587_22_4 | 3319 | 4518 | + | 3.A.1.1.22 |
| CAZyme | MGYG000001587_22 | MGYG000001587_22_5 | 4976 | 7243 | - | GT35 |
| CAZyme | MGYG000001587_22 | MGYG000001587_22_6 | 7372 | 8877 | - | GH77 |
Gene ID: MGYG000001587_22_1
Type: TC
Location: 153 - 1469 (+)
Type: TC
Location: 153 - 1469 (+)
Gene ID: MGYG000001587_22_2
Type: TC
Location: 1557 - 2411 (+)
Type: TC
Location: 1557 - 2411 (+)
Gene ID: MGYG000001587_22_3
Type: TC
Location: 2411 - 3250 (+)
Type: TC
Location: 2411 - 3250 (+)
Gene ID: MGYG000001587_22_4
Type: TC
Location: 3319 - 4518 (+)
Type: TC
Location: 3319 - 4518 (+)
Gene ID: MGYG000001587_22_5
Type: CAZyme
Location: 4976 - 7243 (-)
Type: CAZyme
Location: 4976 - 7243 (-)
Gene ID: MGYG000001587_22_6
Type: CAZyme
Location: 7372 - 8877 (-)
Type: CAZyme
Location: 7372 - 8877 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902470895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.