Cluster: MGYG000001586_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001586
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001586_39 | MGYG000001586_39_7 | 5827 | 6753 | - | CE7 |
| TC | MGYG000001586_39 | MGYG000001586_39_8 | 6885 | 7712 | - | 3.A.1.5.27 |
| TC | MGYG000001586_39 | MGYG000001586_39_9 | 7713 | 9728 | - | 3.A.1.5.25 |
| TC | MGYG000001586_39 | MGYG000001586_39_10 | 9732 | 10688 | - | 3.A.1.5.38 |
| TC | MGYG000001586_39 | MGYG000001586_39_11 | 10846 | 12459 | - | 3.A.1.5.27 |
| pfam | MGYG000001586_39 | MGYG000001586_39_12 | 12825 | 14765 | - | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | MGYG000001586_39 | MGYG000001586_39_13 | 14772 | 16454 | - | 2.A.66.4.4 |
Gene ID: MGYG000001586_39_7
Type: CAZyme
Location: 5827 - 6753 (-)
Type: CAZyme
Location: 5827 - 6753 (-)
Gene ID: MGYG000001586_39_8
Type: TC
Location: 6885 - 7712 (-)
Type: TC
Location: 6885 - 7712 (-)
Gene ID: MGYG000001586_39_9
Type: TC
Location: 7713 - 9728 (-)
Type: TC
Location: 7713 - 9728 (-)
Gene ID: MGYG000001586_39_10
Type: TC
Location: 9732 - 10688 (-)
Type: TC
Location: 9732 - 10688 (-)
Gene ID: MGYG000001586_39_11
Type: TC
Location: 10846 - 12459 (-)
Type: TC
Location: 10846 - 12459 (-)
Gene ID: MGYG000001586_39_12
Type: pfam
Location: 12825 - 14765 (-)
Type: pfam
Location: 12825 - 14765 (-)
Gene ID: MGYG000001586_39_13
Type: TC
Location: 14772 - 16454 (-)
Type: TC
Location: 14772 - 16454 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902470905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.