Cluster: MGYG000001575_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: MGYG000001575
- CGC Family ID: CGCFAM_00014
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001575_13 | MGYG000001575_13_7 | 5949 | 7391 | - | GH1 |
| TC | MGYG000001575_13 | MGYG000001575_13_8 | 7425 | 9245 | - | 4.A.3.1.1 |
| TF | MGYG000001575_13 | MGYG000001575_13_9 | 9540 | 10586 | + | LacI |
| TC | MGYG000001575_13 | MGYG000001575_13_10 | 10696 | 11034 | - | 4.A.3.1.3 |
Gene ID: MGYG000001575_13_7
Type: CAZyme
Location: 5949 - 7391 (-)
Type: CAZyme
Location: 5949 - 7391 (-)
Gene ID: MGYG000001575_13_8
Type: TC
Location: 7425 - 9245 (-)
Type: TC
Location: 7425 - 9245 (-)
Gene ID: MGYG000001575_13_9
Type: TF
Location: 9540 - 10586 (+)
Type: TF
Location: 9540 - 10586 (+)
Gene ID: MGYG000001575_13_10
Type: TC
Location: 10696 - 11034 (-)
Type: TC
Location: 10696 - 11034 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902470815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.