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Cluster: MGYG000001572_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001572_2 MGYG000001572_2_125 113494 114954 + 3.A.9.1.1
pfam MGYG000001572_2 MGYG000001572_2_126 114951 116360 + GatB_Yqey | GatB_N
CAZyme MGYG000001572_2 MGYG000001572_2_127 116510 118969 + GH3
TF MGYG000001572_2 MGYG000001572_2_128 119084 119761 + Trans_reg_C
TC MGYG000001572_2 MGYG000001572_2_129 119754 120746 + 2.A.21.9.2
TC MGYG000001572_2 MGYG000001572_2_130 120834 121517 + 3.A.1.125.3
pfam MGYG000001572_2 MGYG000001572_2_131 121514 124072 + FtsX | FtsX
TC MGYG000001572_2 MGYG000001572_2_132 124140 125192 - 2.A.19.5.3
pfam MGYG000001572_2 MGYG000001572_2_133 125322 126533 + PGA_cap
pfam MGYG000001572_2 MGYG000001572_2_134 126718 128070 + Gln-synt_C | Gln-synt_N
TC MGYG000001572_2 MGYG000001572_2_135 128227 129942 + 1.A.11.2.3
Gene ID: MGYG000001572_2_125
Type: TC
Location: 113494 - 114954 (+)
Gene ID: MGYG000001572_2_126
Type: pfam
Location: 114951 - 116360 (+)
Gene ID: MGYG000001572_2_127
Type: CAZyme
Location: 116510 - 118969 (+)
Gene ID: MGYG000001572_2_128
Type: TF
Location: 119084 - 119761 (+)
Gene ID: MGYG000001572_2_129
Type: TC
Location: 119754 - 120746 (+)
Gene ID: MGYG000001572_2_130
Type: TC
Location: 120834 - 121517 (+)
Gene ID: MGYG000001572_2_131
Type: pfam
Location: 121514 - 124072 (+)
Gene ID: MGYG000001572_2_132
Type: TC
Location: 124140 - 125192 (-)
Gene ID: MGYG000001572_2_133
Type: pfam
Location: 125322 - 126533 (+)
Gene ID: MGYG000001572_2_134
Type: pfam
Location: 126718 - 128070 (+)
Gene ID: MGYG000001572_2_135
Type: TC
Location: 128227 - 129942 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001572_2_134 vegan > omnivore 1.02005 0.04288

🧭 Explore Read Mapping of CGC

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