Cluster: MGYG000001567_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001567
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001567_26 | MGYG000001567_26_11 | 12692 | 14185 | - | 2.A.1.3.17 |
| TC | MGYG000001567_26 | MGYG000001567_26_12 | 14730 | 15194 | + | 1.A.22.1.8 |
| STP | MGYG000001567_26 | MGYG000001567_26_13 | 15532 | 16074 | - | Nitroreductase |
| pfam | MGYG000001567_26 | MGYG000001567_26_14 | 16430 | 17710 | - | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| CAZyme | MGYG000001567_26 | MGYG000001567_26_15 | 18476 | 19789 | - | GH28 |
| NULL(UNKNOWN) | MGYG000001567_26 | MGYG000001567_26_16 | 19791 | 19964 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001567_26 | MGYG000001567_26_17 | 19993 | 21579 | - | 2.A.2.5.1 |
Gene ID: MGYG000001567_26_11
Type: TC
Location: 12692 - 14185 (-)
Type: TC
Location: 12692 - 14185 (-)
Gene ID: MGYG000001567_26_12
Type: TC
Location: 14730 - 15194 (+)
Type: TC
Location: 14730 - 15194 (+)
Gene ID: MGYG000001567_26_13
Type: STP
Location: 15532 - 16074 (-)
Type: STP
Location: 15532 - 16074 (-)
Gene ID: MGYG000001567_26_14
Type: pfam
Location: 16430 - 17710 (-)
Type: pfam
Location: 16430 - 17710 (-)
Gene ID: MGYG000001567_26_15
Type: CAZyme
Location: 18476 - 19789 (-)
Type: CAZyme
Location: 18476 - 19789 (-)
Gene ID: MGYG000001567_26_16
Type:
Location: 19791 - 19964 (-)
Type:
Location: 19791 - 19964 (-)
Gene ID: MGYG000001567_26_17
Type: TC
Location: 19993 - 21579 (-)
Type: TC
Location: 19993 - 21579 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902470695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.