Cluster: MGYG000001564_CGC7
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001564
- CGC Family ID: CGCFAM_00872
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001564_5 | MGYG000001564_5_87 | 98839 | 100176 | - | CE4 |
| STP | MGYG000001564_5 | MGYG000001564_5_88 | 100173 | 100751 | - | HD |
| NULL(UNKNOWN) | MGYG000001564_5 | MGYG000001564_5_89 | 100962 | 102182 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001564_5 | MGYG000001564_5_90 | 102299 | 103318 | - | 2.A.56.1.5 |
| pfam | MGYG000001564_5 | MGYG000001564_5_91 | 103386 | 103871 | - | YcxB |
| TC | MGYG000001564_5 | MGYG000001564_5_92 | 103978 | 105273 | - | 2.A.56.1.5 |
| pfam | MGYG000001564_5 | MGYG000001564_5_93 | 105273 | 105797 | - | DctQ |
| TC | MGYG000001564_5 | MGYG000001564_5_94 | 105870 | 106988 | - | 2.A.56.1.6 |
| TF | MGYG000001564_5 | MGYG000001564_5_95 | 107178 | 107969 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000001564_5 | MGYG000001564_5_96 | 107980 | 109482 | - | 8.A.59.2.1 |
| CAZyme | MGYG000001564_5 | MGYG000001564_5_97 | 109693 | 112281 | - | CBM48 | GH13_9 |
| pfam | MGYG000001564_5 | MGYG000001564_5_98 | 112351 | 112815 | - | MGS |
| pfam | MGYG000001564_5 | MGYG000001564_5_99 | 112832 | 113728 | - | FAA_hydrolase |
| TC | MGYG000001564_5 | MGYG000001564_5_100 | 113848 | 116604 | - | 3.A.3.2.21 |
| peptidase | MGYG000001564_5 | MGYG000001564_5_101 | 116823 | 117752 | - | M20.UPW |
| CAZyme | MGYG000001564_5 | MGYG000001564_5_102 | 117880 | 119907 | - | GH13_11 |
Gene ID: MGYG000001564_5_87
Type: CAZyme
Location: 98839 - 100176 (-)
Type: CAZyme
Location: 98839 - 100176 (-)
Gene ID: MGYG000001564_5_88
Type: STP
Location: 100173 - 100751 (-)
Type: STP
Location: 100173 - 100751 (-)
Gene ID: MGYG000001564_5_89
Type:
Location: 100962 - 102182 (+)
Type:
Location: 100962 - 102182 (+)
Gene ID: MGYG000001564_5_90
Type: TC
Location: 102299 - 103318 (-)
Type: TC
Location: 102299 - 103318 (-)
Gene ID: MGYG000001564_5_91
Type: pfam
Location: 103386 - 103871 (-)
Type: pfam
Location: 103386 - 103871 (-)
Gene ID: MGYG000001564_5_92
Type: TC
Location: 103978 - 105273 (-)
Type: TC
Location: 103978 - 105273 (-)
Gene ID: MGYG000001564_5_93
Type: pfam
Location: 105273 - 105797 (-)
Type: pfam
Location: 105273 - 105797 (-)
Gene ID: MGYG000001564_5_94
Type: TC
Location: 105870 - 106988 (-)
Type: TC
Location: 105870 - 106988 (-)
Gene ID: MGYG000001564_5_95
Type: TF
Location: 107178 - 107969 (-)
Type: TF
Location: 107178 - 107969 (-)
Gene ID: MGYG000001564_5_96
Type: TC
Location: 107980 - 109482 (-)
Type: TC
Location: 107980 - 109482 (-)
Gene ID: MGYG000001564_5_97
Type: CAZyme
Location: 109693 - 112281 (-)
Type: CAZyme
Location: 109693 - 112281 (-)
Gene ID: MGYG000001564_5_98
Type: pfam
Location: 112351 - 112815 (-)
Type: pfam
Location: 112351 - 112815 (-)
Gene ID: MGYG000001564_5_99
Type: pfam
Location: 112832 - 113728 (-)
Type: pfam
Location: 112832 - 113728 (-)
Gene ID: MGYG000001564_5_100
Type: TC
Location: 113848 - 116604 (-)
Type: TC
Location: 113848 - 116604 (-)
Gene ID: MGYG000001564_5_101
Type: peptidase
Location: 116823 - 117752 (-)
Type: peptidase
Location: 116823 - 117752 (-)
Gene ID: MGYG000001564_5_102
Type: CAZyme
Location: 117880 - 119907 (-)
Type: CAZyme
Location: 117880 - 119907 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Enterocloster
Species
Enterocloster clostridioformis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.