Cluster: MGYG000001564_CGC17
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000001564
- CGC Family ID: CGCFAM_00353
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001564_12 | MGYG000001564_12_3 | 2561 | 4363 | - | GH2 |
| CAZyme | MGYG000001564_12 | MGYG000001564_12_4 | 4381 | 6507 | - | PL12_1 |
| CAZyme | MGYG000001564_12 | MGYG000001564_12_5 | 6536 | 7723 | - | GH88 |
| TC | MGYG000001564_12 | MGYG000001564_12_6 | 7726 | 8562 | - | 3.A.1.1.11 |
| TC | MGYG000001564_12 | MGYG000001564_12_7 | 8577 | 9650 | - | 3.A.1.1.34 |
| TC | MGYG000001564_12 | MGYG000001564_12_8 | 9749 | 11110 | - | 3.A.1.1.44 |
| TC | MGYG000001564_12 | MGYG000001564_12_9 | 11381 | 13234 | + | 8.A.59.2.1 |
| TF | MGYG000001564_12 | MGYG000001564_12_10 | 13236 | 14867 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000001564_12 | MGYG000001564_12_11 | 14942 | 17242 | - | CBM67 | GH78 |
| TC | MGYG000001564_12 | MGYG000001564_12_12 | 17590 | 19572 | + | 3.A.10.1.5 |
| pfam | MGYG000001564_12 | MGYG000001564_12_13 | 19716 | 21023 | - | ThiC_Rad_SAM |
| TC | MGYG000001564_12 | MGYG000001564_12_14 | 21447 | 22655 | - | 2.A.23.1.5 |
Gene ID: MGYG000001564_12_3
Type: CAZyme
Location: 2561 - 4363 (-)
Type: CAZyme
Location: 2561 - 4363 (-)
Gene ID: MGYG000001564_12_4
Type: CAZyme
Location: 4381 - 6507 (-)
Type: CAZyme
Location: 4381 - 6507 (-)
Gene ID: MGYG000001564_12_5
Type: CAZyme
Location: 6536 - 7723 (-)
Type: CAZyme
Location: 6536 - 7723 (-)
Gene ID: MGYG000001564_12_6
Type: TC
Location: 7726 - 8562 (-)
Type: TC
Location: 7726 - 8562 (-)
Gene ID: MGYG000001564_12_7
Type: TC
Location: 8577 - 9650 (-)
Type: TC
Location: 8577 - 9650 (-)
Gene ID: MGYG000001564_12_8
Type: TC
Location: 9749 - 11110 (-)
Type: TC
Location: 9749 - 11110 (-)
Gene ID: MGYG000001564_12_9
Type: TC
Location: 11381 - 13234 (+)
Type: TC
Location: 11381 - 13234 (+)
Gene ID: MGYG000001564_12_10
Type: TF
Location: 13236 - 14867 (+)
Type: TF
Location: 13236 - 14867 (+)
Gene ID: MGYG000001564_12_11
Type: CAZyme
Location: 14942 - 17242 (-)
Type: CAZyme
Location: 14942 - 17242 (-)
Gene ID: MGYG000001564_12_12
Type: TC
Location: 17590 - 19572 (+)
Type: TC
Location: 17590 - 19572 (+)
Gene ID: MGYG000001564_12_13
Type: pfam
Location: 19716 - 21023 (-)
Type: pfam
Location: 19716 - 21023 (-)
Gene ID: MGYG000001564_12_14
Type: TC
Location: 21447 - 22655 (-)
Type: TC
Location: 21447 - 22655 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Enterocloster
Species
Enterocloster clostridioformis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.