Cluster: MGYG000001289_CGC20
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001289
- CGC Family ID: CGCFAM_02737
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001289_34 | MGYG000001289_34_1 | 113 | 1258 | - | CBM50 |
| TC | MGYG000001289_34 | MGYG000001289_34_2 | 1618 | 2241 | - | 3.A.2.2.2 |
| TC | MGYG000001289_34 | MGYG000001289_34_3 | 2245 | 3630 | - | 3.A.2.2.2 |
| TC | MGYG000001289_34 | MGYG000001289_34_4 | 3617 | 5407 | - | 3.A.2.2.2 |
| pfam | MGYG000001289_34 | MGYG000001289_34_5 | 5441 | 6145 | - | Acetyltransf_1 | Acetyltransf_3 |
| TC | MGYG000001289_34 | MGYG000001289_34_6 | 6142 | 6462 | - | 3.A.2.2.2 |
| TC | MGYG000001289_34 | MGYG000001289_34_7 | 6443 | 7462 | - | 3.A.2.2.2 |
| NULL(UNKNOWN) | MGYG000001289_34 | MGYG000001289_34_8 | 7472 | 8062 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001289_34 | MGYG000001289_34_9 | 8131 | 8613 | - | 3.A.2.2.2 |
| TC | MGYG000001289_34 | MGYG000001289_34_10 | 8644 | 10605 | - | 3.A.2.2.2 |
Gene ID: MGYG000001289_34_1
Type: CAZyme
Location: 113 - 1258 (-)
Type: CAZyme
Location: 113 - 1258 (-)
Gene ID: MGYG000001289_34_2
Type: TC
Location: 1618 - 2241 (-)
Type: TC
Location: 1618 - 2241 (-)
Gene ID: MGYG000001289_34_3
Type: TC
Location: 2245 - 3630 (-)
Type: TC
Location: 2245 - 3630 (-)
Gene ID: MGYG000001289_34_4
Type: TC
Location: 3617 - 5407 (-)
Type: TC
Location: 3617 - 5407 (-)
Gene ID: MGYG000001289_34_5
Type: pfam
Location: 5441 - 6145 (-)
Type: pfam
Location: 5441 - 6145 (-)
Gene ID: MGYG000001289_34_6
Type: TC
Location: 6142 - 6462 (-)
Type: TC
Location: 6142 - 6462 (-)
Gene ID: MGYG000001289_34_7
Type: TC
Location: 6443 - 7462 (-)
Type: TC
Location: 6443 - 7462 (-)
Gene ID: MGYG000001289_34_8
Type:
Location: 7472 - 8062 (-)
Type:
Location: 7472 - 8062 (-)
Gene ID: MGYG000001289_34_9
Type: TC
Location: 8131 - 8613 (-)
Type: TC
Location: 8131 - 8613 (-)
Gene ID: MGYG000001289_34_10
Type: TC
Location: 8644 - 10605 (-)
Type: TC
Location: 8644 - 10605 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus lactarius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001289_34_4 | vegetarian > omnivore | 1.63580 | 0.00266 |
| MGYG000001289_34_5 | vegan > omnivore | 2.92442 | 0.00918 |
| MGYG000001289_34_5 | vegetarian > omnivore | 3.29819 | 0.00266 |
| MGYG000001289_34_9 | vegan > omnivore | 1.19489 | 0.00918 |