Cluster: MGYG000001289_CGC19
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000001289
- CGC Family ID: CGCFAM_00598
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001289_26 | MGYG000001289_26_2 | 60 | 2330 | - | GT51 |
| pfam | MGYG000001289_26 | MGYG000001289_26_3 | 2398 | 3261 | + | PseudoU_synth_2 |
| CAZyme | MGYG000001289_26 | MGYG000001289_26_4 | 3353 | 7135 | - | GH25 |
| CAZyme | MGYG000001289_26 | MGYG000001289_26_5 | 7279 | 8331 | - | GT113 |
| pfam | MGYG000001289_26 | MGYG000001289_26_6 | 8342 | 9334 | - | Stealth_CR2 | Stealth_CR1 |
| STP | MGYG000001289_26 | MGYG000001289_26_7 | 9331 | 10431 | - | Pyr_redox |
| TC | MGYG000001289_26 | MGYG000001289_26_8 | 10442 | 11857 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | MGYG000001289_26 | MGYG000001289_26_9 | 11860 | 13008 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001289_26 | MGYG000001289_26_10 | 13042 | 14112 | - | GT2 |
| pfam | MGYG000001289_26 | MGYG000001289_26_11 | 14105 | 15076 | - | DUF6625 |
| pfam | MGYG000001289_26 | MGYG000001289_26_12 | 15073 | 15714 | - | DUF1919 |
| CAZyme | MGYG000001289_26 | MGYG000001289_26_13 | 15716 | 16864 | - | GT4 |
| CAZyme | MGYG000001289_26 | MGYG000001289_26_14 | 16867 | 18039 | - | GT4 |
| TC | MGYG000001289_26 | MGYG000001289_26_15 | 18078 | 19454 | - | 9.B.18.1.2 |
| TC | MGYG000001289_26 | MGYG000001289_26_16 | 19474 | 20166 | - | 8.A.3.2.2 |
| TC | MGYG000001289_26 | MGYG000001289_26_17 | 20179 | 20874 | - | 8.A.3.2.3 |
Gene ID: MGYG000001289_26_2
Type: CAZyme
Location: 60 - 2330 (-)
Type: CAZyme
Location: 60 - 2330 (-)
Gene ID: MGYG000001289_26_3
Type: pfam
Location: 2398 - 3261 (+)
Type: pfam
Location: 2398 - 3261 (+)
Gene ID: MGYG000001289_26_4
Type: CAZyme
Location: 3353 - 7135 (-)
Type: CAZyme
Location: 3353 - 7135 (-)
Gene ID: MGYG000001289_26_5
Type: CAZyme
Location: 7279 - 8331 (-)
Type: CAZyme
Location: 7279 - 8331 (-)
Gene ID: MGYG000001289_26_6
Type: pfam
Location: 8342 - 9334 (-)
Type: pfam
Location: 8342 - 9334 (-)
Gene ID: MGYG000001289_26_7
Type: STP
Location: 9331 - 10431 (-)
Type: STP
Location: 9331 - 10431 (-)
Gene ID: MGYG000001289_26_8
Type: TC
Location: 10442 - 11857 (-)
Type: TC
Location: 10442 - 11857 (-)
Gene ID: MGYG000001289_26_9
Type:
Location: 11860 - 13008 (-)
Type:
Location: 11860 - 13008 (-)
Gene ID: MGYG000001289_26_10
Type: CAZyme
Location: 13042 - 14112 (-)
Type: CAZyme
Location: 13042 - 14112 (-)
Gene ID: MGYG000001289_26_11
Type: pfam
Location: 14105 - 15076 (-)
Type: pfam
Location: 14105 - 15076 (-)
Gene ID: MGYG000001289_26_12
Type: pfam
Location: 15073 - 15714 (-)
Type: pfam
Location: 15073 - 15714 (-)
Gene ID: MGYG000001289_26_13
Type: CAZyme
Location: 15716 - 16864 (-)
Type: CAZyme
Location: 15716 - 16864 (-)
Gene ID: MGYG000001289_26_14
Type: CAZyme
Location: 16867 - 18039 (-)
Type: CAZyme
Location: 16867 - 18039 (-)
Gene ID: MGYG000001289_26_15
Type: TC
Location: 18078 - 19454 (-)
Type: TC
Location: 18078 - 19454 (-)
Gene ID: MGYG000001289_26_16
Type: TC
Location: 19474 - 20166 (-)
Type: TC
Location: 19474 - 20166 (-)
Gene ID: MGYG000001289_26_17
Type: TC
Location: 20179 - 20874 (-)
Type: TC
Location: 20179 - 20874 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus lactarius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.