Cluster: MGYG000001287_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001287
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001287_8 | MGYG000001287_8_29 | 35506 | 38640 | + | GH38 |
| TC | MGYG000001287_8 | MGYG000001287_8_30 | 38687 | 39532 | - | 3.A.1.23.2 |
| TC | MGYG000001287_8 | MGYG000001287_8_31 | 39516 | 40370 | - | 3.A.1.32.3 |
| pfam | MGYG000001287_8 | MGYG000001287_8_32 | 40354 | 41166 | - | CbiQ |
| TC | MGYG000001287_8 | MGYG000001287_8_33 | 41215 | 41826 | - | 3.A.1.28.1 |
| sulfatase | MGYG000001287_8 | MGYG000001287_8_34 | 42085 | 43050 | + | S1_46 |
| pfam | MGYG000001287_8 | MGYG000001287_8_35 | 43184 | 44935 | - | TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N |
| TC | MGYG000001287_8 | MGYG000001287_8_36 | 45191 | 46384 | + | 2.A.45.2.6 |
Gene ID: MGYG000001287_8_29
Type: CAZyme
Location: 35506 - 38640 (+)
Type: CAZyme
Location: 35506 - 38640 (+)
Gene ID: MGYG000001287_8_30
Type: TC
Location: 38687 - 39532 (-)
Type: TC
Location: 38687 - 39532 (-)
Gene ID: MGYG000001287_8_31
Type: TC
Location: 39516 - 40370 (-)
Type: TC
Location: 39516 - 40370 (-)
Gene ID: MGYG000001287_8_32
Type: pfam
Location: 40354 - 41166 (-)
Type: pfam
Location: 40354 - 41166 (-)
Gene ID: MGYG000001287_8_33
Type: TC
Location: 41215 - 41826 (-)
Type: TC
Location: 41215 - 41826 (-)
Gene ID: MGYG000001287_8_34
Type: sulfatase
Location: 42085 - 43050 (+)
Type: sulfatase
Location: 42085 - 43050 (+)
Gene ID: MGYG000001287_8_35
Type: pfam
Location: 43184 - 44935 (-)
Type: pfam
Location: 43184 - 44935 (-)
Gene ID: MGYG000001287_8_36
Type: TC
Location: 45191 - 46384 (+)
Type: TC
Location: 45191 - 46384 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium swidsinskii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.