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Cluster: MGYG000001285_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001285_6 MGYG000001285_6_2 2210 3358 - GT4
CAZyme MGYG000001285_6 MGYG000001285_6_3 3450 4568 + GT4
CAZyme MGYG000001285_6 MGYG000001285_6_4 4565 5659 + GT2
CAZyme MGYG000001285_6 MGYG000001285_6_5 5770 7044 + GT4
pfam MGYG000001285_6 MGYG000001285_6_6 7037 7963 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_10 | GDP_Man_Dehyd
CAZyme MGYG000001285_6 MGYG000001285_6_7 7953 8921 + GT2
TC MGYG000001285_6 MGYG000001285_6_8 8953 9888 + 3.A.1.103.4
TC MGYG000001285_6 MGYG000001285_6_9 9888 11063 + 3.A.1.103.5
pfam MGYG000001285_6 MGYG000001285_6_10 11197 12204 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme MGYG000001285_6 MGYG000001285_6_11 12263 13183 + GT2
NULL(UNKNOWN) MGYG000001285_6 MGYG000001285_6_12 13200 13931 - NULL(UNKNOWN)
[View Structural Homologs]
TF MGYG000001285_6 MGYG000001285_6_13 14122 14418 + Whib
CAZyme MGYG000001285_6 MGYG000001285_6_14 14415 17579 + GT2
Gene ID: MGYG000001285_6_2
Type: CAZyme
Location: 2210 - 3358 (-)
Gene ID: MGYG000001285_6_3
Type: CAZyme
Location: 3450 - 4568 (+)
Gene ID: MGYG000001285_6_4
Type: CAZyme
Location: 4565 - 5659 (+)
Gene ID: MGYG000001285_6_5
Type: CAZyme
Location: 5770 - 7044 (+)
Gene ID: MGYG000001285_6_6
Type: pfam
Location: 7037 - 7963 (+)
Gene ID: MGYG000001285_6_7
Type: CAZyme
Location: 7953 - 8921 (+)
Gene ID: MGYG000001285_6_8
Type: TC
Location: 8953 - 9888 (+)
Gene ID: MGYG000001285_6_9
Type: TC
Location: 9888 - 11063 (+)
Gene ID: MGYG000001285_6_10
Type: pfam
Location: 11197 - 12204 (+)
Gene ID: MGYG000001285_6_11
Type: CAZyme
Location: 12263 - 13183 (+)
Gene ID: MGYG000001285_6_12
Type:
Location: 13200 - 13931 (-)
Gene ID: MGYG000001285_6_13
Type: TF
Location: 14122 - 14418 (+)
Gene ID: MGYG000001285_6_14
Type: CAZyme
Location: 14415 - 17579 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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