Cluster: MGYG000001262_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001262
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001262_174 | MGYG000001262_174_2 | 274 | 2076 | + | GH13_4 |
| TC | MGYG000001262_174 | MGYG000001262_174_3 | 2073 | 3233 | + | 2.A.2.6.3 |
| NULL(UNKNOWN) | MGYG000001262_174 | MGYG000001262_174_4 | 3230 | 3385 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001262_174 | MGYG000001262_174_5 | 3416 | 4936 | - | Alginate_exp |
| TC | MGYG000001262_174 | MGYG000001262_174_6 | 5050 | 6390 | - | 2.A.23.1.3 |
Gene ID: MGYG000001262_174_2
Type: CAZyme
Location: 274 - 2076 (+)
Type: CAZyme
Location: 274 - 2076 (+)
Gene ID: MGYG000001262_174_3
Type: TC
Location: 2073 - 3233 (+)
Type: TC
Location: 2073 - 3233 (+)
Gene ID: MGYG000001262_174_4
Type:
Location: 3230 - 3385 (+)
Type:
Location: 3230 - 3385 (+)
Gene ID: MGYG000001262_174_5
Type: pfam
Location: 3416 - 4936 (-)
Type: pfam
Location: 3416 - 4936 (-)
Gene ID: MGYG000001262_174_6
Type: TC
Location: 5050 - 6390 (-)
Type: TC
Location: 5050 - 6390 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Species
Sphingomonas ginsenosidimutans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.