Cluster: MGYG000001262_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001262
- CGC Family ID: CGCFAM_05486
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001262_74 | MGYG000001262_74_2 | 258 | 2354 | + | GH97 |
| peptidase | MGYG000001262_74 | MGYG000001262_74_3 | 2453 | 4345 | - | C44.UNW |
| pfam | MGYG000001262_74 | MGYG000001262_74_4 | 4347 | 5900 | - | Exosortase_EpsH | DUF3485 |
| CAZyme | MGYG000001262_74 | MGYG000001262_74_5 | 5897 | 7060 | - | GT4 |
| pfam | MGYG000001262_74 | MGYG000001262_74_6 | 7057 | 8094 | - | Acetyltransf_6 |
| CAZyme | MGYG000001262_74 | MGYG000001262_74_7 | 8091 | 8951 | - | CE4 |
| TC | MGYG000001262_74 | MGYG000001262_74_8 | 8951 | 9994 | - | 9.B.42.1.1 |
Gene ID: MGYG000001262_74_2
Type: CAZyme
Location: 258 - 2354 (+)
Type: CAZyme
Location: 258 - 2354 (+)
Gene ID: MGYG000001262_74_3
Type: peptidase
Location: 2453 - 4345 (-)
Type: peptidase
Location: 2453 - 4345 (-)
Gene ID: MGYG000001262_74_4
Type: pfam
Location: 4347 - 5900 (-)
Type: pfam
Location: 4347 - 5900 (-)
Gene ID: MGYG000001262_74_5
Type: CAZyme
Location: 5897 - 7060 (-)
Type: CAZyme
Location: 5897 - 7060 (-)
Gene ID: MGYG000001262_74_6
Type: pfam
Location: 7057 - 8094 (-)
Type: pfam
Location: 7057 - 8094 (-)
Gene ID: MGYG000001262_74_7
Type: CAZyme
Location: 8091 - 8951 (-)
Type: CAZyme
Location: 8091 - 8951 (-)
Gene ID: MGYG000001262_74_8
Type: TC
Location: 8951 - 9994 (-)
Type: TC
Location: 8951 - 9994 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Species
Sphingomonas ginsenosidimutans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.