Cluster: MGYG000001262_CGC1
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001262
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001262_5 | MGYG000001262_5_13 | 13319 | 15178 | - | 3.A.1.210.11 |
| peptidase | MGYG000001262_5 | MGYG000001262_5_14 | 15281 | 15898 | - | I51.UPW |
| TC | MGYG000001262_5 | MGYG000001262_5_15 | 16030 | 18099 | + | 9.B.34.1.4 |
| CAZyme | MGYG000001262_5 | MGYG000001262_5_16 | 18145 | 19503 | + | GT32 |
| CAZyme | MGYG000001262_5 | MGYG000001262_5_17 | 19514 | 21763 | - | GT41 |
| TC | MGYG000001262_5 | MGYG000001262_5_18 | 21894 | 22967 | + | 2.A.86.2.2 |
| pfam | MGYG000001262_5 | MGYG000001262_5_19 | 22964 | 24157 | + | Aminotran_5 | KYNU_C |
| pfam | MGYG000001262_5 | MGYG000001262_5_20 | 24154 | 25008 | + | Trp_dioxygenase | Trp_dioxygenase |
| TC | MGYG000001262_5 | MGYG000001262_5_21 | 25011 | 26516 | - | 4.C.1.1.4 |
Gene ID: MGYG000001262_5_13
Type: TC
Location: 13319 - 15178 (-)
Type: TC
Location: 13319 - 15178 (-)
Gene ID: MGYG000001262_5_14
Type: peptidase
Location: 15281 - 15898 (-)
Type: peptidase
Location: 15281 - 15898 (-)
Gene ID: MGYG000001262_5_15
Type: TC
Location: 16030 - 18099 (+)
Type: TC
Location: 16030 - 18099 (+)
Gene ID: MGYG000001262_5_16
Type: CAZyme
Location: 18145 - 19503 (+)
Type: CAZyme
Location: 18145 - 19503 (+)
Gene ID: MGYG000001262_5_17
Type: CAZyme
Location: 19514 - 21763 (-)
Type: CAZyme
Location: 19514 - 21763 (-)
Gene ID: MGYG000001262_5_18
Type: TC
Location: 21894 - 22967 (+)
Type: TC
Location: 21894 - 22967 (+)
Gene ID: MGYG000001262_5_19
Type: pfam
Location: 22964 - 24157 (+)
Type: pfam
Location: 22964 - 24157 (+)
Gene ID: MGYG000001262_5_20
Type: pfam
Location: 24154 - 25008 (+)
Type: pfam
Location: 24154 - 25008 (+)
Gene ID: MGYG000001262_5_21
Type: TC
Location: 25011 - 26516 (-)
Type: TC
Location: 25011 - 26516 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Species
Sphingomonas ginsenosidimutans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.