Cluster: MGYG000001247_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001247
- CGC Family ID: CGCFAM_00680
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001247_1 | MGYG000001247_1_186 | 185468 | 187279 | - | CE12 |
| CAZyme | MGYG000001247_1 | MGYG000001247_1_187 | 187299 | 189536 | - | GH112 |
| CAZyme | MGYG000001247_1 | MGYG000001247_1_188 | 189553 | 190905 | - | GH28 |
| NULL(UNKNOWN) | MGYG000001247_1 | MGYG000001247_1_189 | 190935 | 191603 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001247_1 | MGYG000001247_1_190 | 191618 | 192673 | - | GH105 |
| TC | MGYG000001247_1 | MGYG000001247_1_191 | 192678 | 193523 | - | 3.A.1.1.11 |
| TC | MGYG000001247_1 | MGYG000001247_1_192 | 193527 | 194417 | - | 3.A.1.1.11 |
| STP | MGYG000001247_1 | MGYG000001247_1_193 | 194522 | 195895 | - | SBP_bac_1 |
| TC | MGYG000001247_1 | MGYG000001247_1_194 | 196110 | 197939 | + | 9.B.33.1.1 |
| TF | MGYG000001247_1 | MGYG000001247_1_195 | 197933 | 199432 | + | HTH_AraC |
| TF | MGYG000001247_1 | MGYG000001247_1_196 | 199420 | 200382 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000001247_1 | MGYG000001247_1_197 | 200627 | 202030 | + | GH4 |
Gene ID: MGYG000001247_1_186
Type: CAZyme
Location: 185468 - 187279 (-)
Type: CAZyme
Location: 185468 - 187279 (-)
Gene ID: MGYG000001247_1_187
Type: CAZyme
Location: 187299 - 189536 (-)
Type: CAZyme
Location: 187299 - 189536 (-)
Gene ID: MGYG000001247_1_188
Type: CAZyme
Location: 189553 - 190905 (-)
Type: CAZyme
Location: 189553 - 190905 (-)
Gene ID: MGYG000001247_1_189
Type:
Location: 190935 - 191603 (-)
Type:
Location: 190935 - 191603 (-)
Gene ID: MGYG000001247_1_190
Type: CAZyme
Location: 191618 - 192673 (-)
Type: CAZyme
Location: 191618 - 192673 (-)
Gene ID: MGYG000001247_1_191
Type: TC
Location: 192678 - 193523 (-)
Type: TC
Location: 192678 - 193523 (-)
Gene ID: MGYG000001247_1_192
Type: TC
Location: 193527 - 194417 (-)
Type: TC
Location: 193527 - 194417 (-)
Gene ID: MGYG000001247_1_193
Type: STP
Location: 194522 - 195895 (-)
Type: STP
Location: 194522 - 195895 (-)
Gene ID: MGYG000001247_1_194
Type: TC
Location: 196110 - 197939 (+)
Type: TC
Location: 196110 - 197939 (+)
Gene ID: MGYG000001247_1_195
Type: TF
Location: 197933 - 199432 (+)
Type: TF
Location: 197933 - 199432 (+)
Gene ID: MGYG000001247_1_196
Type: TF
Location: 199420 - 200382 (-)
Type: TF
Location: 199420 - 200382 (-)
Gene ID: MGYG000001247_1_197
Type: CAZyme
Location: 200627 - 202030 (+)
Type: CAZyme
Location: 200627 - 202030 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS1370
Species
UMGS1370 sp900542035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.