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Cluster: MGYG000001247_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001247_18 MGYG000001247_18_8 7796 9115 - 2.A.66.1.37
pfam MGYG000001247_18 MGYG000001247_18_9 9145 9963 - AP_endonuc_2
CAZyme MGYG000001247_18 MGYG000001247_18_10 9965 11530 - GH28
TC MGYG000001247_18 MGYG000001247_18_11 11530 12378 - 3.A.1.1.11
TC MGYG000001247_18 MGYG000001247_18_12 12394 13323 - 3.A.1.1.11
CAZyme MGYG000001247_18 MGYG000001247_18_13 13333 14457 - GH105
TC MGYG000001247_18 MGYG000001247_18_14 14539 15912 - 3.A.1.1.11
NULL(UNKNOWN) MGYG000001247_18 MGYG000001247_18_15 15967 16704 - NULL(UNKNOWN)
[View Structural Homologs]
STP MGYG000001247_18 MGYG000001247_18_16 16734 17948 - SBP_bac_1
TC MGYG000001247_18 MGYG000001247_18_17 18178 20121 + 9.B.33.1.1
Gene ID: MGYG000001247_18_8
Type: TC
Location: 7796 - 9115 (-)
Gene ID: MGYG000001247_18_9
Type: pfam
Location: 9145 - 9963 (-)
Gene ID: MGYG000001247_18_10
Type: CAZyme
Location: 9965 - 11530 (-)
Gene ID: MGYG000001247_18_11
Type: TC
Location: 11530 - 12378 (-)
Gene ID: MGYG000001247_18_12
Type: TC
Location: 12394 - 13323 (-)
Gene ID: MGYG000001247_18_13
Type: CAZyme
Location: 13333 - 14457 (-)
Gene ID: MGYG000001247_18_14
Type: TC
Location: 14539 - 15912 (-)
Gene ID: MGYG000001247_18_15
Type:
Location: 15967 - 16704 (-)
Gene ID: MGYG000001247_18_16
Type: STP
Location: 16734 - 17948 (-)
Gene ID: MGYG000001247_18_17
Type: TC
Location: 18178 - 20121 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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