Cluster: MGYG000001247_CGC17
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000001247
- CGC Family ID: CGCFAM_00563
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001247_6 | MGYG000001247_6_19 | 17907 | 18878 | - | GT2 |
| NULL(UNKNOWN) | MGYG000001247_6 | MGYG000001247_6_20 | 18892 | 20232 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001247_6 | MGYG000001247_6_21 | 20245 | 20931 | - | GT2 |
| pfam | MGYG000001247_6 | MGYG000001247_6_22 | 20938 | 21960 | - | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | RimK | ATP-grasp_4 | ATPgrasp_Ter | PylC-like_N |
| TC | MGYG000001247_6 | MGYG000001247_6_23 | 22039 | 23490 | - | 2.A.66.2.23 |
| CAZyme | MGYG000001247_6 | MGYG000001247_6_24 | 23487 | 24467 | - | GT2 |
| STP | MGYG000001247_6 | MGYG000001247_6_25 | 24475 | 25581 | - | Aminotran_1_2 |
| CAZyme | MGYG000001247_6 | MGYG000001247_6_26 | 25578 | 26597 | - | GT2 |
| CAZyme | MGYG000001247_6 | MGYG000001247_6_27 | 26614 | 27504 | - | GT2 |
| CAZyme | MGYG000001247_6 | MGYG000001247_6_28 | 27501 | 28475 | - | GT8 |
Gene ID: MGYG000001247_6_19
Type: CAZyme
Location: 17907 - 18878 (-)
Type: CAZyme
Location: 17907 - 18878 (-)
Gene ID: MGYG000001247_6_20
Type:
Location: 18892 - 20232 (-)
Type:
Location: 18892 - 20232 (-)
Gene ID: MGYG000001247_6_21
Type: CAZyme
Location: 20245 - 20931 (-)
Type: CAZyme
Location: 20245 - 20931 (-)
Gene ID: MGYG000001247_6_22
Type: pfam
Location: 20938 - 21960 (-)
Type: pfam
Location: 20938 - 21960 (-)
Gene ID: MGYG000001247_6_23
Type: TC
Location: 22039 - 23490 (-)
Type: TC
Location: 22039 - 23490 (-)
Gene ID: MGYG000001247_6_24
Type: CAZyme
Location: 23487 - 24467 (-)
Type: CAZyme
Location: 23487 - 24467 (-)
Gene ID: MGYG000001247_6_25
Type: STP
Location: 24475 - 25581 (-)
Type: STP
Location: 24475 - 25581 (-)
Gene ID: MGYG000001247_6_26
Type: CAZyme
Location: 25578 - 26597 (-)
Type: CAZyme
Location: 25578 - 26597 (-)
Gene ID: MGYG000001247_6_27
Type: CAZyme
Location: 26614 - 27504 (-)
Type: CAZyme
Location: 26614 - 27504 (-)
Gene ID: MGYG000001247_6_28
Type: CAZyme
Location: 27501 - 28475 (-)
Type: CAZyme
Location: 27501 - 28475 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS1370
Species
UMGS1370 sp900542035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.