Cluster: MGYG000001241_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001241
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001241_6 | MGYG000001241_6_40 | 42248 | 43669 | - | GH1 |
| TC | MGYG000001241_6 | MGYG000001241_6_41 | 43745 | 45523 | - | 4.A.3.1.1 |
| TF | MGYG000001241_6 | MGYG000001241_6_42 | 45800 | 46810 | + | LacI |
| CAZyme | MGYG000001241_6 | MGYG000001241_6_43 | 47075 | 48514 | - | GH1 |
| TC | MGYG000001241_6 | MGYG000001241_6_44 | 48581 | 50344 | - | 4.A.3.1.1 |
| TF | MGYG000001241_6 | MGYG000001241_6_45 | 50702 | 51706 | + | LacI |
| TC | MGYG000001241_6 | MGYG000001241_6_46 | 51921 | 52259 | + | 4.A.3.1.2 |
Gene ID: MGYG000001241_6_40
Type: CAZyme
Location: 42248 - 43669 (-)
Type: CAZyme
Location: 42248 - 43669 (-)
Gene ID: MGYG000001241_6_41
Type: TC
Location: 43745 - 45523 (-)
Type: TC
Location: 43745 - 45523 (-)
Gene ID: MGYG000001241_6_42
Type: TF
Location: 45800 - 46810 (+)
Type: TF
Location: 45800 - 46810 (+)
Gene ID: MGYG000001241_6_43
Type: CAZyme
Location: 47075 - 48514 (-)
Type: CAZyme
Location: 47075 - 48514 (-)
Gene ID: MGYG000001241_6_44
Type: TC
Location: 48581 - 50344 (-)
Type: TC
Location: 48581 - 50344 (-)
Gene ID: MGYG000001241_6_45
Type: TF
Location: 50702 - 51706 (+)
Type: TF
Location: 50702 - 51706 (+)
Gene ID: MGYG000001241_6_46
Type: TC
Location: 51921 - 52259 (+)
Type: TC
Location: 51921 - 52259 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900758885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.