Cluster: MGYG000001227_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001227
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001227_31 | MGYG000001227_31_7 | 4740 | 6161 | - | GH1 |
| TC | MGYG000001227_31 | MGYG000001227_31_8 | 6237 | 8015 | - | 4.A.3.1.1 |
| TF | MGYG000001227_31 | MGYG000001227_31_9 | 8291 | 9301 | + | LacI |
| CAZyme | MGYG000001227_31 | MGYG000001227_31_10 | 9489 | 10928 | - | GH1 |
| TC | MGYG000001227_31 | MGYG000001227_31_11 | 10995 | 12770 | - | 4.A.3.1.1 |
| TF | MGYG000001227_31 | MGYG000001227_31_12 | 13128 | 14132 | + | LacI |
| TC | MGYG000001227_31 | MGYG000001227_31_13 | 14347 | 14685 | + | 4.A.3.1.2 |
Gene ID: MGYG000001227_31_7
Type: CAZyme
Location: 4740 - 6161 (-)
Type: CAZyme
Location: 4740 - 6161 (-)
Gene ID: MGYG000001227_31_8
Type: TC
Location: 6237 - 8015 (-)
Type: TC
Location: 6237 - 8015 (-)
Gene ID: MGYG000001227_31_9
Type: TF
Location: 8291 - 9301 (+)
Type: TF
Location: 8291 - 9301 (+)
Gene ID: MGYG000001227_31_10
Type: CAZyme
Location: 9489 - 10928 (-)
Type: CAZyme
Location: 9489 - 10928 (-)
Gene ID: MGYG000001227_31_11
Type: TC
Location: 10995 - 12770 (-)
Type: TC
Location: 10995 - 12770 (-)
Gene ID: MGYG000001227_31_12
Type: TF
Location: 13128 - 14132 (+)
Type: TF
Location: 13128 - 14132 (+)
Gene ID: MGYG000001227_31_13
Type: TC
Location: 14347 - 14685 (+)
Type: TC
Location: 14347 - 14685 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902470345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.