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Cluster: MGYG000001221_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001221_8 MGYG000001221_8_1 3 245 - 4.A.3.1.2
TF MGYG000001221_8 MGYG000001221_8_2 460 1464 - LacI
TC MGYG000001221_8 MGYG000001221_8_3 1822 3597 + 4.A.3.1.1
CAZyme MGYG000001221_8 MGYG000001221_8_4 3664 5103 + GH1
TF MGYG000001221_8 MGYG000001221_8_5 5385 6422 - LacI
CAZyme MGYG000001221_8 MGYG000001221_8_6 6764 8206 + GH1
TC MGYG000001221_8 MGYG000001221_8_7 8383 10143 + 4.A.3.1.1
TF MGYG000001221_8 MGYG000001221_8_8 10477 11487 - LacI
TC MGYG000001221_8 MGYG000001221_8_9 11763 13541 + 4.A.3.1.1
CAZyme MGYG000001221_8 MGYG000001221_8_10 13618 15039 + GH1
Gene ID: MGYG000001221_8_1
Type: TC
Location: 3 - 245 (-)
Gene ID: MGYG000001221_8_2
Type: TF
Location: 460 - 1464 (-)
Gene ID: MGYG000001221_8_3
Type: TC
Location: 1822 - 3597 (+)
Gene ID: MGYG000001221_8_4
Type: CAZyme
Location: 3664 - 5103 (+)
Gene ID: MGYG000001221_8_5
Type: TF
Location: 5385 - 6422 (-)
Gene ID: MGYG000001221_8_6
Type: CAZyme
Location: 6764 - 8206 (+)
Gene ID: MGYG000001221_8_7
Type: TC
Location: 8383 - 10143 (+)
Gene ID: MGYG000001221_8_8
Type: TF
Location: 10477 - 11487 (-)
Gene ID: MGYG000001221_8_9
Type: TC
Location: 11763 - 13541 (+)
Gene ID: MGYG000001221_8_10
Type: CAZyme
Location: 13618 - 15039 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001221_8_5 vegetarian > omnivore 1.00541 0.03181

🧭 Explore Read Mapping of CGC

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