Cluster: MGYG000001202_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001202
- CGC Family ID: CGCFAM_05249
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001202_1 | MGYG000001202_1_105 | 115883 | 116608 | - | 3.A.1.3.15 |
| TC | MGYG000001202_1 | MGYG000001202_1_106 | 116595 | 117287 | - | 3.A.1.3.12 |
| TC | MGYG000001202_1 | MGYG000001202_1_107 | 117356 | 118135 | - | 3.A.1.3.27 |
| TC | MGYG000001202_1 | MGYG000001202_1_108 | 118355 | 118990 | - | 3.D.1.8.1 |
| pfam | MGYG000001202_1 | MGYG000001202_1_109 | 119218 | 121902 | + | YfhO |
| CAZyme | MGYG000001202_1 | MGYG000001202_1_110 | 122124 | 123779 | - | CBM35 | GH26 |
| CAZyme | MGYG000001202_1 | MGYG000001202_1_111 | 124015 | 124860 | - | GT2 |
Gene ID: MGYG000001202_1_105
Type: TC
Location: 115883 - 116608 (-)
Type: TC
Location: 115883 - 116608 (-)
Gene ID: MGYG000001202_1_106
Type: TC
Location: 116595 - 117287 (-)
Type: TC
Location: 116595 - 117287 (-)
Gene ID: MGYG000001202_1_107
Type: TC
Location: 117356 - 118135 (-)
Type: TC
Location: 117356 - 118135 (-)
Gene ID: MGYG000001202_1_108
Type: TC
Location: 118355 - 118990 (-)
Type: TC
Location: 118355 - 118990 (-)
Gene ID: MGYG000001202_1_109
Type: pfam
Location: 119218 - 121902 (+)
Type: pfam
Location: 119218 - 121902 (+)
Gene ID: MGYG000001202_1_110
Type: CAZyme
Location: 122124 - 123779 (-)
Type: CAZyme
Location: 122124 - 123779 (-)
Gene ID: MGYG000001202_1_111
Type: CAZyme
Location: 124015 - 124860 (-)
Type: CAZyme
Location: 124015 - 124860 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.