Cluster: MGYG000001202_CGC17
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001202
- CGC Family ID: CGCFAM_05250
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001202_8 | MGYG000001202_8_35 | 41478 | 42524 | + | 3.A.1.210.2 |
| TC | MGYG000001202_8 | MGYG000001202_8_36 | 42569 | 42925 | + | 3.A.1.106.2 |
| TC | MGYG000001202_8 | MGYG000001202_8_37 | 43077 | 44276 | - | 2.A.36.2.1 |
| TC | MGYG000001202_8 | MGYG000001202_8_38 | 44438 | 46618 | - | 3.A.1.106.3 |
| pfam | MGYG000001202_8 | MGYG000001202_8_39 | 46653 | 47195 | - | DUF1854 |
| TC | MGYG000001202_8 | MGYG000001202_8_40 | 47213 | 49483 | - | 3.A.1.135.5 |
| NULL(UNKNOWN) | MGYG000001202_8 | MGYG000001202_8_41 | 49648 | 49764 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001202_8 | MGYG000001202_8_42 | 49847 | 51343 | - | 2.A.22.5.3 |
| STP | MGYG000001202_8 | MGYG000001202_8_43 | 51558 | 52511 | - | PfkB |
| CAZyme | MGYG000001202_8 | MGYG000001202_8_44 | 52526 | 53896 | - | GH32 |
| TC | MGYG000001202_8 | MGYG000001202_8_45 | 53960 | 55897 | - | 4.A.1.2.12 |
| TF | MGYG000001202_8 | MGYG000001202_8_46 | 56077 | 57063 | - | LacI |
| TC | MGYG000001202_8 | MGYG000001202_8_47 | 57214 | 58539 | - | 2.A.66.1.33 |
| CAZyme | MGYG000001202_8 | MGYG000001202_8_48 | 58554 | 61214 | - | GH59 |
Gene ID: MGYG000001202_8_35
Type: TC
Location: 41478 - 42524 (+)
Type: TC
Location: 41478 - 42524 (+)
Gene ID: MGYG000001202_8_36
Type: TC
Location: 42569 - 42925 (+)
Type: TC
Location: 42569 - 42925 (+)
Gene ID: MGYG000001202_8_37
Type: TC
Location: 43077 - 44276 (-)
Type: TC
Location: 43077 - 44276 (-)
Gene ID: MGYG000001202_8_38
Type: TC
Location: 44438 - 46618 (-)
Type: TC
Location: 44438 - 46618 (-)
Gene ID: MGYG000001202_8_39
Type: pfam
Location: 46653 - 47195 (-)
Type: pfam
Location: 46653 - 47195 (-)
Gene ID: MGYG000001202_8_40
Type: TC
Location: 47213 - 49483 (-)
Type: TC
Location: 47213 - 49483 (-)
Gene ID: MGYG000001202_8_41
Type:
Location: 49648 - 49764 (-)
Type:
Location: 49648 - 49764 (-)
Gene ID: MGYG000001202_8_42
Type: TC
Location: 49847 - 51343 (-)
Type: TC
Location: 49847 - 51343 (-)
Gene ID: MGYG000001202_8_43
Type: STP
Location: 51558 - 52511 (-)
Type: STP
Location: 51558 - 52511 (-)
Gene ID: MGYG000001202_8_44
Type: CAZyme
Location: 52526 - 53896 (-)
Type: CAZyme
Location: 52526 - 53896 (-)
Gene ID: MGYG000001202_8_45
Type: TC
Location: 53960 - 55897 (-)
Type: TC
Location: 53960 - 55897 (-)
Gene ID: MGYG000001202_8_46
Type: TF
Location: 56077 - 57063 (-)
Type: TF
Location: 56077 - 57063 (-)
Gene ID: MGYG000001202_8_47
Type: TC
Location: 57214 - 58539 (-)
Type: TC
Location: 57214 - 58539 (-)
Gene ID: MGYG000001202_8_48
Type: CAZyme
Location: 58554 - 61214 (-)
Type: CAZyme
Location: 58554 - 61214 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.