Cluster: MGYG000001202_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001202
- CGC Family ID: CGCFAM_00003
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001202_8 | MGYG000001202_8_18 | 23464 | 24336 | + | 9.B.18.1.2 |
| pfam | MGYG000001202_8 | MGYG000001202_8_19 | 24333 | 25214 | + | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | MGYG000001202_8 | MGYG000001202_8_20 | 25207 | 26403 | + | GT4 |
| CAZyme | MGYG000001202_8 | MGYG000001202_8_21 | 26431 | 27588 | + | GT4 |
| NULL(UNKNOWN) | MGYG000001202_8 | MGYG000001202_8_22 | 27575 | 28984 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001202_8 | MGYG000001202_8_23 | 29098 | 30534 | + | 2.A.66.2.16 |
Gene ID: MGYG000001202_8_18
Type: TC
Location: 23464 - 24336 (+)
Type: TC
Location: 23464 - 24336 (+)
Gene ID: MGYG000001202_8_19
Type: pfam
Location: 24333 - 25214 (+)
Type: pfam
Location: 24333 - 25214 (+)
Gene ID: MGYG000001202_8_20
Type: CAZyme
Location: 25207 - 26403 (+)
Type: CAZyme
Location: 25207 - 26403 (+)
Gene ID: MGYG000001202_8_21
Type: CAZyme
Location: 26431 - 27588 (+)
Type: CAZyme
Location: 26431 - 27588 (+)
Gene ID: MGYG000001202_8_22
Type:
Location: 27575 - 28984 (+)
Type:
Location: 27575 - 28984 (+)
Gene ID: MGYG000001202_8_23
Type: TC
Location: 29098 - 30534 (+)
Type: TC
Location: 29098 - 30534 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.