Cluster: MGYG000001202_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001202
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001202_1 | MGYG000001202_1_91 | 97771 | 100104 | - | 3.A.3.6.10 |
| TF | MGYG000001202_1 | MGYG000001202_1_92 | 100138 | 100503 | - | HTH_5 |
| TC | MGYG000001202_1 | MGYG000001202_1_93 | 101152 | 101823 | + | 1.C.113.1.1 |
| CAZyme | MGYG000001202_1 | MGYG000001202_1_94 | 102040 | 103518 | + | GH77 |
| CAZyme | MGYG000001202_1 | MGYG000001202_1_95 | 104146 | 106527 | + | GT35 |
| pfam | MGYG000001202_1 | MGYG000001202_1_96 | 106789 | 107343 | + | PAP2 | PAP2_3 |
| CAZyme | MGYG000001202_1 | MGYG000001202_1_97 | 107469 | 108269 | + | CE4 |
Gene ID: MGYG000001202_1_91
Type: TC
Location: 97771 - 100104 (-)
Type: TC
Location: 97771 - 100104 (-)
Gene ID: MGYG000001202_1_92
Type: TF
Location: 100138 - 100503 (-)
Type: TF
Location: 100138 - 100503 (-)
Gene ID: MGYG000001202_1_93
Type: TC
Location: 101152 - 101823 (+)
Type: TC
Location: 101152 - 101823 (+)
Gene ID: MGYG000001202_1_94
Type: CAZyme
Location: 102040 - 103518 (+)
Type: CAZyme
Location: 102040 - 103518 (+)
Gene ID: MGYG000001202_1_95
Type: CAZyme
Location: 104146 - 106527 (+)
Type: CAZyme
Location: 104146 - 106527 (+)
Gene ID: MGYG000001202_1_96
Type: pfam
Location: 106789 - 107343 (+)
Type: pfam
Location: 106789 - 107343 (+)
Gene ID: MGYG000001202_1_97
Type: CAZyme
Location: 107469 - 108269 (+)
Type: CAZyme
Location: 107469 - 108269 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.