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Cluster: MGYG000001200_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001200_6 MGYG000001200_6_17 17529 17972 + 4.A.6.1.16
pfam MGYG000001200_6 MGYG000001200_6_18 17972 18253 + YajC
TC MGYG000001200_6 MGYG000001200_6_19 18290 18772 + 4.A.6.1.4
TC MGYG000001200_6 MGYG000001200_6_20 18863 19663 + 4.A.6.1.4
TC MGYG000001200_6 MGYG000001200_6_21 19653 20735 + 4.A.6.1.4
TF MGYG000001200_6 MGYG000001200_6_22 20921 21652 + GntR
STP MGYG000001200_6 MGYG000001200_6_23 21767 22933 + SIS | SIS
CAZyme MGYG000001200_6 MGYG000001200_6_24 23051 24220 + CE9
Gene ID: MGYG000001200_6_17
Type: TC
Location: 17529 - 17972 (+)
Gene ID: MGYG000001200_6_18
Type: pfam
Location: 17972 - 18253 (+)
Gene ID: MGYG000001200_6_19
Type: TC
Location: 18290 - 18772 (+)
Gene ID: MGYG000001200_6_20
Type: TC
Location: 18863 - 19663 (+)
Gene ID: MGYG000001200_6_21
Type: TC
Location: 19653 - 20735 (+)
Gene ID: MGYG000001200_6_22
Type: TF
Location: 20921 - 21652 (+)
Gene ID: MGYG000001200_6_23
Type: STP
Location: 21767 - 22933 (+)
Gene ID: MGYG000001200_6_24
Type: CAZyme
Location: 23051 - 24220 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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