Cluster: MGYG000001186_CGC41
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001186
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001186_20 | MGYG000001186_20_19 | 20830 | 22866 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | MGYG000001186_20 | MGYG000001186_20_20 | 22876 | 23100 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001186_20 | MGYG000001186_20_21 | 23223 | 24956 | - | 1.B.52.2.2 |
| NULL(UNKNOWN) | MGYG000001186_20 | MGYG000001186_20_22 | 24976 | 26325 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001186_20 | MGYG000001186_20_23 | 26502 | 27347 | - | 3.A.1.1.2 |
| TC | MGYG000001186_20 | MGYG000001186_20_24 | 27347 | 28318 | - | 3.A.1.1.48 |
| NULL(UNKNOWN) | MGYG000001186_20 | MGYG000001186_20_25 | 28388 | 29779 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000001186_20 | MGYG000001186_20_26 | 29982 | 30722 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000001186_20 | MGYG000001186_20_27 | 30773 | 33472 | - | GH94 |
| CAZyme | MGYG000001186_20 | MGYG000001186_20_28 | 33573 | 35984 | - | GH94 |
| CAZyme | MGYG000001186_20 | MGYG000001186_20_29 | 36173 | 39916 | - | CBM4 | CBM4 | GH16_3 |
Gene ID: MGYG000001186_20_19
Type: TC
Location: 20830 - 22866 (-)
Type: TC
Location: 20830 - 22866 (-)
Gene ID: MGYG000001186_20_20
Type:
Location: 22876 - 23100 (-)
Type:
Location: 22876 - 23100 (-)
Gene ID: MGYG000001186_20_21
Type: TC
Location: 23223 - 24956 (-)
Type: TC
Location: 23223 - 24956 (-)
Gene ID: MGYG000001186_20_22
Type:
Location: 24976 - 26325 (-)
Type:
Location: 24976 - 26325 (-)
Gene ID: MGYG000001186_20_23
Type: TC
Location: 26502 - 27347 (-)
Type: TC
Location: 26502 - 27347 (-)
Gene ID: MGYG000001186_20_24
Type: TC
Location: 27347 - 28318 (-)
Type: TC
Location: 27347 - 28318 (-)
Gene ID: MGYG000001186_20_25
Type:
Location: 28388 - 29779 (-)
Type:
Location: 28388 - 29779 (-)
Gene ID: MGYG000001186_20_26
Type: TF
Location: 29982 - 30722 (+)
Type: TF
Location: 29982 - 30722 (+)
Gene ID: MGYG000001186_20_27
Type: CAZyme
Location: 30773 - 33472 (-)
Type: CAZyme
Location: 30773 - 33472 (-)
Gene ID: MGYG000001186_20_28
Type: CAZyme
Location: 33573 - 35984 (-)
Type: CAZyme
Location: 33573 - 35984 (-)
Gene ID: MGYG000001186_20_29
Type: CAZyme
Location: 36173 - 39916 (-)
Type: CAZyme
Location: 36173 - 39916 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp905209075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.