Cluster: MGYG000001186_CGC39
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000001186
- CGC Family ID: CGCFAM_00224
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001186_17 | MGYG000001186_17_16 | 19907 | 21532 | + | 3.A.1.1.29 |
| CAZyme | MGYG000001186_17 | MGYG000001186_17_17 | 21630 | 23561 | + | CE1 |
| CAZyme | MGYG000001186_17 | MGYG000001186_17_18 | 23586 | 24728 | + | GH8 |
| CAZyme | MGYG000001186_17 | MGYG000001186_17_19 | 24895 | 28587 | + | CBM86 | CBM9 | GH10 |
| CAZyme | MGYG000001186_17 | MGYG000001186_17_20 | 28701 | 30449 | + | CE17 |
| CAZyme | MGYG000001186_17 | MGYG000001186_17_21 | 30469 | 32040 | + | CBM91 | GH43_12 |
| TF | MGYG000001186_17 | MGYG000001186_17_22 | 32030 | 32887 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000001186_17 | MGYG000001186_17_23 | 33046 | 35190 | + | GH3 |
| TC | MGYG000001186_17 | MGYG000001186_17_24 | 35287 | 37053 | + | 8.A.59.2.1 |
| TF | MGYG000001186_17 | MGYG000001186_17_25 | 37065 | 38660 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000001186_17 | MGYG000001186_17_26 | 38802 | 40472 | + | 3.A.1.1.29 |
| TC | MGYG000001186_17 | MGYG000001186_17_27 | 40545 | 41501 | + | 3.A.1.1.29 |
| TC | MGYG000001186_17 | MGYG000001186_17_28 | 41516 | 42424 | + | 3.A.1.1.29 |
| pfam | MGYG000001186_17 | MGYG000001186_17_29 | 43028 | 46195 | + | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| CAZyme | MGYG000001186_17 | MGYG000001186_17_30 | 46229 | 48697 | + | GT35 |
Gene ID: MGYG000001186_17_16
Type: TC
Location: 19907 - 21532 (+)
Type: TC
Location: 19907 - 21532 (+)
Gene ID: MGYG000001186_17_17
Type: CAZyme
Location: 21630 - 23561 (+)
Type: CAZyme
Location: 21630 - 23561 (+)
Gene ID: MGYG000001186_17_18
Type: CAZyme
Location: 23586 - 24728 (+)
Type: CAZyme
Location: 23586 - 24728 (+)
Gene ID: MGYG000001186_17_19
Type: CAZyme
Location: 24895 - 28587 (+)
Type: CAZyme
Location: 24895 - 28587 (+)
Gene ID: MGYG000001186_17_20
Type: CAZyme
Location: 28701 - 30449 (+)
Type: CAZyme
Location: 28701 - 30449 (+)
Gene ID: MGYG000001186_17_21
Type: CAZyme
Location: 30469 - 32040 (+)
Type: CAZyme
Location: 30469 - 32040 (+)
Gene ID: MGYG000001186_17_22
Type: TF
Location: 32030 - 32887 (-)
Type: TF
Location: 32030 - 32887 (-)
Gene ID: MGYG000001186_17_23
Type: CAZyme
Location: 33046 - 35190 (+)
Type: CAZyme
Location: 33046 - 35190 (+)
Gene ID: MGYG000001186_17_24
Type: TC
Location: 35287 - 37053 (+)
Type: TC
Location: 35287 - 37053 (+)
Gene ID: MGYG000001186_17_25
Type: TF
Location: 37065 - 38660 (+)
Type: TF
Location: 37065 - 38660 (+)
Gene ID: MGYG000001186_17_26
Type: TC
Location: 38802 - 40472 (+)
Type: TC
Location: 38802 - 40472 (+)
Gene ID: MGYG000001186_17_27
Type: TC
Location: 40545 - 41501 (+)
Type: TC
Location: 40545 - 41501 (+)
Gene ID: MGYG000001186_17_28
Type: TC
Location: 41516 - 42424 (+)
Type: TC
Location: 41516 - 42424 (+)
Gene ID: MGYG000001186_17_29
Type: pfam
Location: 43028 - 46195 (+)
Type: pfam
Location: 43028 - 46195 (+)
Gene ID: MGYG000001186_17_30
Type: CAZyme
Location: 46229 - 48697 (+)
Type: CAZyme
Location: 46229 - 48697 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp905209075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.