Cluster: MGYG000001186_CGC38
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001186
- CGC Family ID: CGCFAM_00237
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001186_17 | MGYG000001186_17_4 | 5009 | 6025 | + | GT2 |
| pfam | MGYG000001186_17 | MGYG000001186_17_5 | 6147 | 7067 | - | NadA |
| TC | MGYG000001186_17 | MGYG000001186_17_6 | 7277 | 8623 | + | 3.D.10.1.4 |
| pfam | MGYG000001186_17 | MGYG000001186_17_7 | 8589 | 9443 | + | QRPTase_C | QRPTase_N |
| TF | MGYG000001186_17 | MGYG000001186_17_8 | 9457 | 10011 | + | HTH_11 |
| TC | MGYG000001186_17 | MGYG000001186_17_9 | 10024 | 11028 | + | 8.A.5.1.3 |
Gene ID: MGYG000001186_17_4
Type: CAZyme
Location: 5009 - 6025 (+)
Type: CAZyme
Location: 5009 - 6025 (+)
Gene ID: MGYG000001186_17_5
Type: pfam
Location: 6147 - 7067 (-)
Type: pfam
Location: 6147 - 7067 (-)
Gene ID: MGYG000001186_17_6
Type: TC
Location: 7277 - 8623 (+)
Type: TC
Location: 7277 - 8623 (+)
Gene ID: MGYG000001186_17_7
Type: pfam
Location: 8589 - 9443 (+)
Type: pfam
Location: 8589 - 9443 (+)
Gene ID: MGYG000001186_17_8
Type: TF
Location: 9457 - 10011 (+)
Type: TF
Location: 9457 - 10011 (+)
Gene ID: MGYG000001186_17_9
Type: TC
Location: 10024 - 11028 (+)
Type: TC
Location: 10024 - 11028 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp905209075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001186_17_5 | vegetarian > vegan | 1.03814 | 0.01621 |