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Cluster: MGYG000001186_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001186_1 MGYG000001186_1_117 133629 135530 + GH2
pfam MGYG000001186_1 MGYG000001186_1_118 135514 136461 + Bgal_small_N
TF MGYG000001186_1 MGYG000001186_1_119 136507 137424 + HTH_AraC | HTH_AraC
TC MGYG000001186_1 MGYG000001186_1_120 137790 139103 + 3.A.1.1.4
TC MGYG000001186_1 MGYG000001186_1_121 139189 140079 + 3.A.1.1.4
TC MGYG000001186_1 MGYG000001186_1_122 140072 140881 + 3.A.1.1.4
CAZyme MGYG000001186_1 MGYG000001186_1_123 140901 143939 + GH2
TF MGYG000001186_1 MGYG000001186_1_124 143942 144940 + LacI
TF MGYG000001186_1 MGYG000001186_1_125 145043 145900 - HTH_AraC | HTH_AraC
TC MGYG000001186_1 MGYG000001186_1_126 146455 147819 + 2.A.2.3.3
Gene ID: MGYG000001186_1_117
Type: CAZyme
Location: 133629 - 135530 (+)
Gene ID: MGYG000001186_1_118
Type: pfam
Location: 135514 - 136461 (+)
Gene ID: MGYG000001186_1_119
Type: TF
Location: 136507 - 137424 (+)
Gene ID: MGYG000001186_1_120
Type: TC
Location: 137790 - 139103 (+)
Gene ID: MGYG000001186_1_121
Type: TC
Location: 139189 - 140079 (+)
Gene ID: MGYG000001186_1_122
Type: TC
Location: 140072 - 140881 (+)
Gene ID: MGYG000001186_1_123
Type: CAZyme
Location: 140901 - 143939 (+)
Gene ID: MGYG000001186_1_124
Type: TF
Location: 143942 - 144940 (+)
Gene ID: MGYG000001186_1_125
Type: TF
Location: 145043 - 145900 (-)
Gene ID: MGYG000001186_1_126
Type: TC
Location: 146455 - 147819 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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